RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 ICAM4Q14773 271 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 TBR1Q16650 682 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 LEMD1Q68G75 181 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 CACNG8Q8WXS5 425 aa12.4□□□□□ -0.42
EPHB4-206ENST00000487222 OTOFQ9HC10 1997 aa12.4□□□□□ -0.43
EPHB4-206ENST00000487222 KBTBD11-OT1A0A1B0GTJ5 212 aa12.4□□□□□ -0.43
EPHB4-206ENST00000487222 SCO2A0A1W2PP80 73 aa12.4□□□□□ -0.43
EPHB4-206ENST00000487222 H0YIZ8 118 aa12.4□□□□□ -0.43
EPHB4-206ENST00000487222 FGF16O43320 207 aa12.4□□□□□ -0.43
EPHB4-206ENST00000487222 GPX1P07203 203 aa12.4□□□□□ -0.43
EPHB4-206ENST00000487222 ATP5G3P48201 142 aa12.4□□□□□ -0.43
EPHB4-206ENST00000487222 CTAG1AP78358 180 aa12.4□□□□□ -0.43
EPHB4-206ENST00000487222 HERPUD1Q15011 391 aa12.4□□□□□ -0.43
EPHB4-206ENST00000487222 ACSF3Q4G176 576 aaPredicted RBP12.39□□□□□ -0.43
EPHB4-206ENST00000487222 FAM90A1Q86YD7 464 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 FLVCR1-AS1Q8TAF5 88 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 C7orf71A4D174 169 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 H7C2G1 150 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 PEX7O00628 323 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 GTF3AQ92664 365 aaKnown RBP12.39□□□□□ -0.43
EPHB4-206ENST00000487222 WBP1Q96G27 269 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 GPR82Q96P67 336 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 A0A087WV48 116 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 ADIPOQQ15848 244 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 EEF1AKMT3Q96AZ1 226 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 TBL2Q9Y4P3 447 aaKnown RBP12.39□□□□□ -0.43
EPHB4-206ENST00000487222 LGALS3P17931 250 aaKnown RBP12.39□□□□□ -0.43
EPHB4-206ENST00000487222 AMMECR1LQ6DCA0 310 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 KCNS1Q96KK3 526 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 TMEM106BQ9NUM4 274 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 LCTP09848 1927 aa12.39□□□□□ -0.43
EPHB4-206ENST00000487222 DLX6P56179 175 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 PAQR4Q8N4S7 273 aaPredicted RBP12.38□□□□□ -0.43
EPHB4-206ENST00000487222 RAXQ9Y2V3 346 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 SOX21Q9Y651 276 aaPredicted RBP12.38□□□□□ -0.43
EPHB4-206ENST00000487222 RIF1Q5UIP0 2472 aaKnown RBP12.38□□□□□ -0.43
EPHB4-206ENST00000487222 NCOR1O75376 2440 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 TRBV20OR9-2A0A075B6H5 130 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 IGLV3-32A0A0A0MS00 114 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 IQCF6A8MYZ5 107 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 PRSS2P07478 247 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 LRTM2Q8N967 370 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 ZNF414Q96IQ9 312 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 GFI1Q99684 422 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 F11RQ9Y624 299 aaKnown RBP12.38□□□□□ -0.43
EPHB4-206ENST00000487222 PSME4Q14997 1843 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 A0A0G2JMM0 328 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 A0A1W2PPB8 328 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 A0A1W2PRS3 328 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 KIR3DP1A8MWS1 328 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 RPL23P62829 140 aaKnown RBP12.38□□□□□ -0.43
EPHB4-206ENST00000487222 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 LINC00469Q8N7U9 141 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 FAM131CQ96AQ9 280 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 IMMP2LQ96T52 175 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 PATJQ8NI35 1801 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 A1L4Q6 167 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 LINC00271P0C7V0 271 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 TAS2R60P59551 318 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 KIR2DL4Q99706 377 aa12.38□□□□□ -0.43
EPHB4-206ENST00000487222 IGKV1D-13A0A0B4J2D9 117 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 EFEMP2O95967 443 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 IGKV1-13P0DP09 117 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 TSPOP30536 169 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 TNFSF10P50591 281 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 KLK15Q9H2R5 256 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 IGHV2OR16-5A0A0B4J2B6 119 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 PRR19A6NJB7 356 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 MEF2CQ06413 473 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-206ENST00000487222 JOSD1Q15040 202 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-206ENST00000487222 FAM216BQ8N7L0 139 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 PLPPR1Q8TBJ4 325 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 ESPL1Q14674 2120 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 FOXI3A8MTJ6 420 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-206ENST00000487222 APOBEC3AP31941 199 aaPredicted RBP12.37□□□□□ -0.43
EPHB4-206ENST00000487222 OR52E5Q8NH55 327 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 RNASEH2CQ8TDP1 164 aaKnown RBP12.37□□□□□ -0.43
EPHB4-206ENST00000487222 CACNA1DQ01668 2161 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 A0A1B0GUT8 65 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 OR11H12B2RN74 326 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 ID3Q02535 119 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 PAPPA-AS1Q5QFB9 102 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 OR11H1Q8NG94 326 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 OR11H2Q8NH07 326 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 DCTN5Q9BTE1 182 aa12.37□□□□□ -0.43
EPHB4-206ENST00000487222 GFRA3O60609 400 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 TMEM144Q7Z5S9 345 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 LYZL4Q96KX0 146 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 DPM3Q9P2X0 92 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 PEF1Q9UBV8 284 aaKnown RBP12.36□□□□□ -0.43
EPHB4-206ENST00000487222 LOC102723996A0A087X1L8 192 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 WNT10AQ9GZT5 417 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 IGHV3-35A0A0C4DH35 117 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 PRELID3AQ96N28 172 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 FBXL15Q9H469 300 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 IGKV3D-15A0A087WSY6 115 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 IGKV3-15P01624 115 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 TEX45Q8NA69 505 aa12.36□□□□□ -0.43
EPHB4-206ENST00000487222 UMODP07911 640 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 SRSF3P84103 164 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms