RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 CENPSQ8N2Z9 138 aa11.38□□□□□ -0.59
LIMS3-205ENST00000487150 WFDC9Q8NEX5 89 aa11.38□□□□□ -0.59
LIMS3-205ENST00000487150 MS4A10Q96PG2 267 aa11.38□□□□□ -0.59
LIMS3-205ENST00000487150 MGAM2Q2M2H8 2515 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 IGKV1-39P01597 117 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 IGKV1D-39P04432 117 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 APELAP0DMC3 54 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 CTRB1P17538 263 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 ZP3P21754 424 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 RAB25P57735 213 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 RHOGP84095 191 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 KIAA0141Q14154 515 aaPredicted RBP11.37□□□□□ -0.59
LIMS3-205ENST00000487150 ZNF846Q147U1 533 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 SP6Q3SY56 376 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 CTRB2Q6GPI1 263 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 ETV3LQ6ZN32 361 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 LGI3Q8N145 548 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 LINC00482Q8N8I6 264 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 GLYATL2Q8WU03 294 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 RAX2Q96IS3 184 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 SDHCQ99643 169 aaPredicted RBP11.37□□□□□ -0.59
LIMS3-205ENST00000487150 GNB4Q9HAV0 340 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 NDUFA4L2Q9NRX3 87 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 ZMAT5Q9UDW3 170 aaKnown RBP11.37□□□□□ -0.59
LIMS3-205ENST00000487150 TMEM56-RWDD3S4R434 201 aa11.37□□□□□ -0.59
LIMS3-205ENST00000487150 TRBV9A0A0B4J1U6 114 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 DUXBA0A1W2PPF3 345 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 IGLC7A0M8Q6 106 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 HMX3A6NHT5 357 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 LINC01619G3V211 115 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 NDUFB6O95139 128 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 HSPB1P04792 205 aaKnown RBP11.36□□□□□ -0.59
LIMS3-205ENST00000487150 MECP2P51608 486 aaKnown RBP11.36□□□□□ -0.59
LIMS3-205ENST00000487150 ATP5G2Q06055 141 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 TMEM268Q5VZI3 342 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 OR11H1Q8NG94 326 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 OR1N2Q8NGR9 330 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 CXorf58Q96LI9 332 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 HINT2Q9BX68 163 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 PLEKHA3Q9HB20 300 aa11.36□□□□□ -0.59
LIMS3-205ENST00000487150 RANGRFQ9HD47 186 aaPredicted RBP11.36□□□□□ -0.59
LIMS3-205ENST00000487150 TRRAPQ9Y4A5 3859 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 A0A0B4J2A0 478 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 TEX50A0A1B0GTY4 177 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 IGKV1-5P01602 117 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 AREGP15514 252 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 VAMP1P23763 118 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 HSPE1P61604 102 aaKnown RBP11.35□□□□□ -0.59
LIMS3-205ENST00000487150 PRCDQ00LT1 54 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 KLK9Q2XQG4 91 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 DEFB136Q30KP8 78 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 ZNF343Q6P1L6 599 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 C18orf65Q6ZTR6 163 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 SLC35G3Q8N808 338 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 CASTOR1Q8WTX7 329 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 TMEM230Q96A57 120 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 OR5B12Q96R08 314 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 ENY2Q9NPA8 101 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 SHPKQ9UHJ6 478 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 KLK9Q9UKQ9 250 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 NSG2Q9Y328 171 aa11.35□□□□□ -0.59
LIMS3-205ENST00000487150 LYRM1O43325 122 aa11.34□□□□□ -0.59
LIMS3-205ENST00000487150 IFNA17P01571 189 aa11.34□□□□□ -0.59
LIMS3-205ENST00000487150 P0C879 139 aa11.34□□□□□ -0.59
LIMS3-205ENST00000487150 OR13C7P0DN81 318 aa11.34□□□□□ -0.59
LIMS3-205ENST00000487150 ERHP84090 104 aaKnown RBP11.34□□□□□ -0.59
LIMS3-205ENST00000487150 EXOSC2Q13868 293 aaKnown RBP11.34□□□□□ -0.59
LIMS3-205ENST00000487150 TMEM187Q14656 261 aa11.34□□□□□ -0.59
LIMS3-205ENST00000487150 C15orf32Q32M92 178 aa11.34□□□□□ -0.59
LIMS3-205ENST00000487150 MZT2BQ6NZ67 158 aa11.34□□□□□ -0.59
LIMS3-205ENST00000487150 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
LIMS3-205ENST00000487150 WNK1Q9H4A3 2382 aa11.34□□□□□ -0.59
LIMS3-205ENST00000487150 LINC00854A0A1B0GVQ3 168 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 A0A1B0GW64 132 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 E7EUB6 86 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 INS-IGF2F8WCM5 200 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 IGHV3-11P01762 117 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 CCR6P51684 374 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 TATDN3Q17R31 274 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 AARDQ4LEZ3 155 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 SELENOHQ8IZQ5 122 aaKnown RBP11.33□□□□□ -0.6
LIMS3-205ENST00000487150 ZNF114Q8NC26 417 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 OR1P1Q8NH06 330 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 OR52E5Q8NH55 327 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 EEF1AKMT3Q96AZ1 226 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 ATP6V0BQ99437 205 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 PEF1Q9UBV8 284 aaKnown RBP11.33□□□□□ -0.6
LIMS3-205ENST00000487150 FBXL7Q9UJT9 491 aa11.33□□□□□ -0.6
LIMS3-205ENST00000487150 F11RQ9Y624 299 aaKnown RBP11.33□□□□□ -0.6
LIMS3-205ENST00000487150 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
LIMS3-205ENST00000487150 TRBV7-1A0A0A6YYK4 115 aa11.32□□□□□ -0.6
LIMS3-205ENST00000487150 UPK1BO75841 260 aa11.32□□□□□ -0.6
LIMS3-205ENST00000487150 OR2J3O76001 311 aa11.32□□□□□ -0.6
LIMS3-205ENST00000487150 SFT2D2O95562 160 aa11.32□□□□□ -0.6
LIMS3-205ENST00000487150 SULT1A3P0DMM9 295 aa11.32□□□□□ -0.6
LIMS3-205ENST00000487150 SULT1A4P0DMN0 295 aa11.32□□□□□ -0.6
LIMS3-205ENST00000487150 MYOD1P15172 320 aa11.32□□□□□ -0.6
LIMS3-205ENST00000487150 HOXA1P49639 335 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms