RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 CALHM1Q8IU99 346 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 MKXQ8IYA7 352 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 SAXO1Q8IYX7 474 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 GDPD1Q8N9F7 314 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 ASCC1Q8N9N2 400 aaKnown RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 TMEM104Q8NE00 496 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 OR4M1Q8NGD0 313 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 OR10R2Q8NGX6 335 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 OR13G1Q8NGZ3 307 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 OR2G3Q8NGZ4 309 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 OR52E5Q8NH55 327 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 OR51F2Q8NH61 342 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 LINC01560Q8TB33 94 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 LGALS14Q8TCE9 139 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 C15orf40Q8WUR7 153 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 TNFAIP8L1Q8WVP5 186 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 AQP3Q92482 292 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 MRPS24Q96EL2 167 aaKnown RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 PIK3IP1Q96FE7 263 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 SPACA5Q96QH8 159 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 S100A13Q99584 98 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 SDHCQ99643 169 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 MICU1Q9BPX6 476 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 NRIP2Q9BQI9 281 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 CCDC32Q9BV29 185 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 SRRQ9GZT4 340 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 FGF23Q9GZV9 251 aaPredicted RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 CST11Q9H112 138 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 METTL9Q9H1A3 318 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 LPAR5Q9H1C0 372 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 ATG5Q9H1Y0 275 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 OR51I2Q9H344 312 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 ZNF442Q9H7R0 627 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 RHOFQ9HBH0 211 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 CA10Q9NS85 328 aa2.83□□□□□ -1.96
PTCD3-216ENST00000487043 MYEF2Q9P2K5 600 aaKnown RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 PEF1Q9UBV8 284 aaKnown RBP2.83□□□□□ -1.96
PTCD3-216ENST00000487043 SPENQ96T58 3664 aaKnown RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 HIVEP3Q5T1R4 2406 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 ZFYVE26Q68DK2 2539 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 A0A0B4J2A0 478 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 IGKV1-12A0A0C4DH73 117 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 A0A0G2JMP0 313 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 A0A0X1KG70 313 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 LOC105371267A0A1B0GV96 52 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 A0A1B0GW55 424 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 TMEM210A6NLX4 147 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 E7EQL1 145 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 TRAPPC2LH3BP13 241 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 J3QT63 122 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 SLC31A2O15432 143 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 GSTZ1O43708 216 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 ANGPTL7O43827 346 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 NOS1APO75052 506 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 FCN3O75636 299 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 CRTAPO75718 401 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 UPK1BO75841 260 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 CCNKO75909 580 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 CYB5AP00167 134 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 MOSP00540 346 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 IGKV1D-12P01611 117 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 OR4A8P0C604 315 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 DUX4L2P0CJ85 424 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 DUX4L3P0CJ86 424 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 DUX4L4P0CJ87 422 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 DUX4L5P0CJ88 424 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 DUX4L6P0CJ89 424 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 DUX4L7P0CJ90 424 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 GTF2F2P13984 249 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 CDK2P24941 298 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 LOXP28300 417 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 CD200P41217 278 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 HAAOP46952 286 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 AP2S1P53680 142 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 FGF8P55075 233 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 RAB25P57735 213 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 TAS2R20P59543 309 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 UBE2MP61081 183 aaKnown RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 MRPS10P82664 201 aaKnown RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 MRPS15P82914 257 aaKnown RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 CLINT1Q14677 625 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 CDK10Q15131 360 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 RSU1Q15404 277 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 OR8G1Q15617 311 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 PYDC2Q56P42 97 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 TMEM69Q5SWH9 247 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 HACD4Q5VWC8 232 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 ELP2Q6IA86 826 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 HAGHLQ6PII5 290 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 DUX4L9Q6RFH8 374 aaPredicted RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 SLC25A26Q70HW3 274 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 ZNF767PQ75MW2 155 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 WDR86Q86TI4 376 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 SLC51BQ86UW2 128 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 C11orf53Q8IXP5 236 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 OSR2Q8N2R0 312 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 Q8N402 240 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 ACBD4Q8NC06 268 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 OR4M2Q8NGB6 313 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 OR51T1Q8NGJ9 327 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms