RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 CELSR3Q9NYQ7 3312 aa10.04□□□□□ -0.8
COL3A1-206ENST00000487010 C19orf67A6NJJ6 358 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 FNDC10F2Z333 226 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 MT-ND6P03923 174 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 CECR9P0C854 216 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 CRYBB3P26998 211 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 RPL19P84098 196 aaKnown RBP10.03□□□□□ -0.8
COL3A1-206ENST00000487010 PSG5Q15238 335 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 MBNL2Q5VZF2 373 aaKnown RBP10.03□□□□□ -0.8
COL3A1-206ENST00000487010 OR4A47Q6IF82 309 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 WDR73Q6P4I2 378 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 Q8N976 141 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 CORO2AQ92828 525 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 ENY2Q9NPA8 101 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 TMEM167BQ9NRX6 74 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 IL19Q9UHD0 177 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 NAT8BQ9UHF3 227 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 SAA2-SAA4A0A096LPE2 208 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 SRRM5B3KS81 715 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 ACTL6BO94805 426 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 CRYABP02511 175 aaKnown RBP10.03□□□□□ -0.8
COL3A1-206ENST00000487010 ZNF883P0CG24 379 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 KRTDAPP60985 99 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 MZT1Q08AG7 82 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 GUSBP1Q15486 140 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 OR10J3Q5JRS4 329 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 PQLC2Q6ZP29 291 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 TMEM136Q6ZRR5 245 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 OR4B1Q8NGF8 309 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 PPP1R35Q8TAP8 253 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 TRIB1Q96RU8 372 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 FAM103A1Q9BTL3 118 aaKnown RBP10.03□□□□□ -0.8
COL3A1-206ENST00000487010 LPAR2Q9HBW0 351 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 OSTCQ9NRP0 149 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 ZNF586Q9NXT0 402 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 SLC45A2Q9UMX9 530 aa10.03□□□□□ -0.8
COL3A1-206ENST00000487010 AHRRA9YTQ3 701 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 DIRC3C9JPN6 131 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 NPSP0C0P6 89 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 COX19Q49B96 90 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 UTF1Q5T230 341 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 DOLPP1Q86YN1 238 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 CNEP1R1Q8N9A8 125 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 C1orf162Q8NEQ5 155 aaPredicted RBP10.02□□□□□ -0.81
COL3A1-206ENST00000487010 RNF2Q99496 336 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 NABP2Q9BQ15 211 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 RNASE7Q9H1E1 156 aaKnown RBP10.02□□□□□ -0.81
COL3A1-206ENST00000487010 TBL2Q9Y4P3 447 aaKnown RBP10.02□□□□□ -0.81
COL3A1-206ENST00000487010 AHCTF1Q8WYP5 2266 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 FRYQ5TBA9 3013 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 IGHV3OR15-7A0A075B7D8 119 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 ITGB1BP1O14713 200 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 SPINK4O60575 86 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 RAB7AP51149 207 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 TMEM178AQ8NBL3 297 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 OR2Z1Q8NG97 314 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 LEAP2Q969E1 77 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 ZNF503Q96F45 646 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 KCNS1Q96KK3 526 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 ARRDC1-AS1Q9H2J1 176 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 NRN1Q9NPD7 142 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 PPP1R14DQ9NXH3 145 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 CALYQ9NYX4 217 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 TECRQ9NZ01 308 aaKnown RBP10.02□□□□□ -0.81
COL3A1-206ENST00000487010 IDI2-AS1Q9NZ38 188 aa10.02□□□□□ -0.81
COL3A1-206ENST00000487010 IGHV2OR16-5A0A0B4J2B6 119 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 A0A1W2PS18 150 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 ISLRO14498 428 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 OR5G3P0C626 314 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 CGB3P0DN86 165 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 CGB7P0DN87 165 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 MYOD1P15172 320 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 CTRLP40313 264 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 KIR2DL2P43627 348 aaPredicted RBP10.01□□□□□ -0.81
COL3A1-206ENST00000487010 BATFQ16520 125 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 KIAA1644Q3SXP7 199 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 TIGITQ495A1 244 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 CT45A1Q5HYN5 189 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 C1orf174Q8IYL3 243 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 ZNRF1Q8ND25 227 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 CT45A3Q8NHU0 189 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 OR51B2Q9Y5P1 312 aa10.01□□□□□ -0.81
COL3A1-206ENST00000487010 IGLV1-44P01699 117 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 LINC00614P0C842 121 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 AMTP48728 403 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 FXYD3Q14802 87 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 C17orf58Q2M2W7 97 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 ATP1A1-AS1Q5TC04 95 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 VWA1Q6PCB0 445 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 ZNF436-AS1Q8NC38 126 aaPredicted RBP10□□□□□ -0.81
COL3A1-206ENST00000487010 RCHY1Q96PM5 261 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 HINT2Q9BX68 163 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 ZNF253O75346 499 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 IGLV2-8P01709 118 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 AMY1AP04745 511 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 SAA2P0DJI9 122 aaPredicted RBP10□□□□□ -0.81
COL3A1-206ENST00000487010 CFHR2P36980 270 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 ZNF83P51522 516 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 SLC35B1P78383 322 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 GCSAMQ8N6F7 178 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms