RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 GAGE2DQ9UEU5 116 aa4.41□□□□□ -1.7
COPS3-209ENST00000486810 HEBP2Q9Y5Z4 205 aa4.41□□□□□ -1.7
COPS3-209ENST00000486810 SPCS1Q9Y6A9 102 aa4.41□□□□□ -1.7
COPS3-209ENST00000486810 DOCK3Q8IZD9 2030 aa4.41□□□□□ -1.7
COPS3-209ENST00000486810 SCN7AQ01118 1682 aa4.41□□□□□ -1.7
COPS3-209ENST00000486810 TIAM2Q8IVF5 1701 aa4.41□□□□□ -1.7
COPS3-209ENST00000486810 RGPD3A6NKT7 1758 aaPredicted RBP4.4□□□□□ -1.7
COPS3-209ENST00000486810 RGPD4Q7Z3J3 1758 aa4.4□□□□□ -1.7
COPS3-209ENST00000486810 C5orf49A4QMS7 147 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 VCYO14598 125 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 BUB3O43684 328 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 ENSAO43768 121 aaKnown RBP4.4□□□□□ -1.71
COPS3-209ENST00000486810 GYPAP02724 150 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 IGLC6P0CF74 106 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 RPL35AP18077 110 aaKnown RBP4.4□□□□□ -1.71
COPS3-209ENST00000486810 RBMXP38159 391 aaKnown RBP4.4□□□□□ -1.71
COPS3-209ENST00000486810 EFNB2P52799 333 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 OR1D5P58170 312 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 RND3P61587 244 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 ARL16Q0P5N6 197 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 LAMTOR4Q0VGL1 99 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 IHHQ14623 411 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 ZNF74Q16587 644 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 KRTAP24-1Q3LI83 254 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 GGTA1PQ4G0N0 100 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 CDC42EP5Q6NZY7 148 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 SLC25A34Q6PIV7 304 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 ZNF322Q6U7Q0 402 aaPredicted RBP4.4□□□□□ -1.71
COPS3-209ENST00000486810 AMTNQ6UX39 209 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 TMEM64Q6YI46 380 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 Q6ZTC4 211 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 ZNF534Q76KX8 674 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 ZNF615Q8N8J6 731 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 OR10G2Q8NGC3 310 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 JOSD2Q8TAC2 188 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 SCGB1C1Q8TD33 95 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 NEIL2Q969S2 332 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 PLEKHB2Q96CS7 222 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 NAA38Q9BRA0 125 aaKnown RBP4.4□□□□□ -1.71
COPS3-209ENST00000486810 SLC25A39Q9BZJ4 359 aaPredicted RBP4.4□□□□□ -1.71
COPS3-209ENST00000486810 NEUROG3Q9Y4Z2 214 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 CSAG2Q9Y5P2 127 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 MPC1Q9Y5U8 109 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 DLEC1Q9Y238 1755 aa4.4□□□□□ -1.71
COPS3-209ENST00000486810 KIF26AQ9ULI4 1882 aaPredicted RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 LMO7Q8WWI1 1683 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 TRAV1-1A0A0B4J248 108 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 LOC107984640A0A0U1RRK4 108 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 SMIM28A0A1B0GU29 152 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 LOC102725191A0A1B0GVB3 256 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 GGTLC3B5MD39 225 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 H0YL77 283 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 SH2D1BO14796 132 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 LDB3O75112 727 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 ZNF737O75373 536 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 KLF7O75840 302 aaPredicted RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 NDUFA7O95182 113 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 CA1P00915 261 aaPredicted RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 CA2P00918 260 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 HBE1P02100 147 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 HOXB7P09629 217 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 MYOD1P15172 320 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 VDAC1P21796 283 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 AADACP22760 399 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 ASIPP42127 132 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 VDAC2P45880 294 aaPredicted RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 MTCP1P56278 107 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 CD164Q04900 197 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 ATP5G2Q06055 141 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 DIAPH2-AS1Q14236 149 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 GGTLC2Q14390 218 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 RPL7L1Q6DKI1 246 aaKnown RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 CD164L2Q6UWJ8 174 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 ZNF841Q6ZN19 808 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 GOLT1AQ6ZVE7 132 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 SPATA12Q7Z6I5 190 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 CMC1Q7Z7K0 106 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 SLC25A42Q86VD7 318 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 CIARTQ8N365 385 aaPredicted RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 OR10J6PQ8NGY7 276 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 MRPL30Q8TCC3 161 aaKnown RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 APOBEC4Q8WW27 367 aaKnown RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 RTN4IP1Q8WWV3 396 aaPredicted RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 CRYGNQ8WXF5 182 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 ARPC1AQ92747 370 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 BORCS7Q96B45 105 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 NEURL3Q96EH8 262 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 SFXN3Q9BWM7 321 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 NRN1Q9NPD7 142 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 UBE2TQ9NPD8 197 aaPredicted RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 C1orf123Q9NWV4 160 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 TAAR3PQ9P1P4 343 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 TRMT112Q9UI30 125 aaKnown RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 TRAPPC1Q9Y5R8 145 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 UBR2Q8IWV8 1755 aa4.39□□□□□ -1.71
COPS3-209ENST00000486810 BRCA1P38398 1863 aaKnown RBP4.39□□□□□ -1.71
COPS3-209ENST00000486810 BAZ2BQ9UIF8 2168 aaKnown RBP4.38□□□□□ -1.71
COPS3-209ENST00000486810 KIDINS220Q9ULH0 1771 aa4.38□□□□□ -1.71
COPS3-209ENST00000486810 TRAV5A0A0B4J249 113 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms