RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 WDR61Q9GZS3 305 aaKnown RBP1.75□□□□□ -2.13
SMC4-218ENST00000486711 CST9LQ9H4G1 147 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 STRCP1A6NGW2 1772 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 NYNRINQ9P2P1 1898 aaKnown RBP1.74□□□□□ -2.13
SMC4-218ENST00000486711 A0A0D9SEW6 157 aa1.74□□□□□ -2.13
SMC4-218ENST00000486711 NAPSAO96009 420 aa1.74□□□□□ -2.13
SMC4-218ENST00000486711 IGHV3-7P01780 117 aa1.74□□□□□ -2.13
SMC4-218ENST00000486711 RPS17P08708 135 aaKnown RBP1.74□□□□□ -2.13
SMC4-218ENST00000486711 NFYAP23511 347 aaPredicted RBP1.74□□□□□ -2.13
SMC4-218ENST00000486711 MYL6P60660 151 aa1.74□□□□□ -2.13
SMC4-218ENST00000486711 NDUFA5Q16718 116 aa1.74□□□□□ -2.13
SMC4-218ENST00000486711 ALKAL1Q6UXT8 129 aa1.74□□□□□ -2.13
SMC4-218ENST00000486711 LRRC25Q8N386 305 aaPredicted RBP1.74□□□□□ -2.13
SMC4-218ENST00000486711 MCFD2Q8NI22 146 aa1.74□□□□□ -2.13
SMC4-218ENST00000486711 OR8D2Q9GZM6 311 aa1.74□□□□□ -2.13
SMC4-218ENST00000486711 PRTFDC1Q9NRG1 225 aa1.74□□□□□ -2.13
SMC4-218ENST00000486711 SIPA1L1O43166 1804 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 SCN9AQ15858 1988 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 MEIS3P1A6NDR6 274 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 FABP5P3A8MUU1 101 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 ORC5O43913 435 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 LYPLA2O95372 231 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 HLA-DRB1P01911 266 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 SERPINA6P08185 405 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 TRGC1P0CF51 173 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 AQP4P55087 323 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 CCL20P78556 96 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 IBA57Q5T440 356 aaKnown RBP1.73□□□□□ -2.13
SMC4-218ENST00000486711 SYPL2Q5VXT5 272 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 MRPL30Q8TCC3 161 aaKnown RBP1.73□□□□□ -2.13
SMC4-218ENST00000486711 KLK6Q92876 244 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 ULBP3Q9BZM4 244 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 CISHQ9NSE2 258 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 CMTM6Q9NX76 183 aa1.73□□□□□ -2.13
SMC4-218ENST00000486711 PLB1Q6P1J6 1458 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 OR51F1A6NGY5 319 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 CLDN24A6NM45 220 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 F8W036 122 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 ZNF737O75373 536 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 HIST1H1TP22492 207 aaPredicted RBP1.72□□□□□ -2.13
SMC4-218ENST00000486711 CDKN2CP42773 168 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 EVX1P49640 407 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 EIF2B2P49770 351 aaKnown RBP1.72□□□□□ -2.13
SMC4-218ENST00000486711 ACOT6Q3I5F7 207 aaPredicted RBP1.72□□□□□ -2.13
SMC4-218ENST00000486711 FAM27BQ5VT28 67 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 SPOPLQ6IQ16 392 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 LPCAT3Q6P1A2 487 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 RPL22L1Q6P5R6 122 aaKnown RBP1.72□□□□□ -2.13
SMC4-218ENST00000486711 ANKRD29Q8N6D5 301 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 CLDN22Q8N7P3 220 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 PPP1R2P1Q96PQ5 205 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 RGS12O14924 1447 aa1.72□□□□□ -2.13
SMC4-218ENST00000486711 TRBV10-2A0A0K0K1G8 114 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 CHP2O43745 196 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 S100A6P06703 90 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 HIST1H2BOP23527 126 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 HIST1H2BBP33778 126 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 ANP32AP39687 249 aaKnown RBP1.71□□□□□ -2.14
SMC4-218ENST00000486711 AKR1C3P42330 323 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 MAGEA12P43365 314 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 FXYD2P54710 66 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 HIST1H2BDP58876 126 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 SNRPD2P62316 118 aaKnown RBP1.71□□□□□ -2.14
SMC4-218ENST00000486711 HIST1H2BCP62807 126 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 HBA1P69905 142 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 AESQ08117 197 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 HIST2H2BEQ16778 126 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.71□□□□□ -2.14
SMC4-218ENST00000486711 AADACL3Q5VUY0 350 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 Q6ZRN7 208 aaPredicted RBP1.71□□□□□ -2.14
SMC4-218ENST00000486711 C7orf65Q6ZTY9 151 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 ZNF563Q8TA94 476 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 HIST1H2BHQ93079 126 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 HIST1H2BNQ99877 126 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 HIST1H2BMQ99879 126 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 PKIGQ9Y2B9 76 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 NCKAP5O14513 1909 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
SMC4-218ENST00000486711 DISP1Q96F81 1524 aa1.71□□□□□ -2.14
SMC4-218ENST00000486711 PQLC2LA1A4F0 135 aa1.7□□□□□ -2.14
SMC4-218ENST00000486711 METTL15P1P0C7V9 234 aa1.7□□□□□ -2.14
SMC4-218ENST00000486711 RPS4Y1P22090 263 aaKnown RBP1.7□□□□□ -2.14
SMC4-218ENST00000486711 KCNJ8Q15842 424 aa1.7□□□□□ -2.14
SMC4-218ENST00000486711 RPS19BP1Q86WX3 136 aaKnown RBP1.7□□□□□ -2.14
SMC4-218ENST00000486711 MBD3L1Q8WWY6 194 aa1.7□□□□□ -2.14
SMC4-218ENST00000486711 C8orf76Q96K31 380 aa1.7□□□□□ -2.14
SMC4-218ENST00000486711 HSPB9Q9BQS6 159 aa1.7□□□□□ -2.14
SMC4-218ENST00000486711 NAA38Q9BRA0 125 aaKnown RBP1.7□□□□□ -2.14
SMC4-218ENST00000486711 DERL1Q9BUN8 251 aa1.7□□□□□ -2.14
SMC4-218ENST00000486711 OR51V1Q9H2C8 321 aa1.7□□□□□ -2.14
SMC4-218ENST00000486711 UCK1Q9HA47 277 aa1.7□□□□□ -2.14
SMC4-218ENST00000486711 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.7□□□□□ -2.14
SMC4-218ENST00000486711 COL11A1P12107 1806 aaPredicted RBP1.7□□□□□ -2.14
SMC4-218ENST00000486711 SCAF11Q99590 1463 aaKnown RBP1.69□□□□□ -2.14
SMC4-218ENST00000486711 KPNA3O00505 521 aaPredicted RBP1.69□□□□□ -2.14
SMC4-218ENST00000486711 SDCBPO00560 298 aaPredicted RBP1.69□□□□□ -2.14
SMC4-218ENST00000486711 CIAO1O76071 339 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 CRYZL1O95825 349 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 CRPP02741 224 aa1.69□□□□□ -2.14
SMC4-218ENST00000486711 RPL5P46777 297 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms