RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 MEGF9Q9H1U4 602 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 NDUFA4L2Q9NRX3 87 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 PAIP2BQ9ULR5 123 aaKnown RBP11.51□□□□□ -0.57
COL9A1-207ENST00000486080 SULT1A1P50225 295 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 DYNLT3P51808 116 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 GNB1P62873 340 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 SSBP2P81877 361 aaPredicted RBP11.5□□□□□ -0.57
COL9A1-207ENST00000486080 TNXAQ16473 311 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 TMEM14EPQ6UXP3 125 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 MMD2Q8IY49 270 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 OR8H1Q8NGG4 311 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 OR1L8Q8NGR8 309 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 C22orf15Q8WYQ4 148 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 HIPK2Q9H2X6 1198 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 SLA2Q9H6Q3 261 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 KIAA1456Q9P272 454 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 CACFD1Q9UGQ2 172 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 STRAPQ9Y3F4 350 aaKnown RBP11.5□□□□□ -0.57
COL9A1-207ENST00000486080 OTOGQ6ZRI0 2925 aa11.5□□□□□ -0.57
COL9A1-207ENST00000486080 MDFIC2A0A1B0GVS7 189 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
COL9A1-207ENST00000486080 C15orf62A8K5M9 175 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 FSHBP01225 129 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 CLINT1Q14677 625 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 C5orf64Q2M2E5 130 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 RPL7L1Q6DKI1 246 aaKnown RBP11.49□□□□□ -0.57
COL9A1-207ENST00000486080 SLC51BQ86UW2 128 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 STX12Q86Y82 276 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 OR5C1Q8NGR4 320 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 PLEKHA3Q9HB20 300 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 MXRA5Q9NR99 2828 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 IFNA10P01566 189 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 COMPP49747 757 aaPredicted RBP11.49□□□□□ -0.57
COL9A1-207ENST00000486080 KRTAP1-1Q07627 177 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 BAXQ07812 192 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 TEX261Q6UWH6 196 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 NANPQ8TBE9 248 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 SSX3Q99909 188 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 ENY2Q9NPA8 101 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 U3KQ87 197 aa11.49□□□□□ -0.57
COL9A1-207ENST00000486080 MAST4O15021 2626 aa11.48□□□□□ -0.57
COL9A1-207ENST00000486080 TAAR5O14804 337 aa11.48□□□□□ -0.57
COL9A1-207ENST00000486080 ACTL6BO94805 426 aa11.48□□□□□ -0.57
COL9A1-207ENST00000486080 CA2P00918 260 aa11.48□□□□□ -0.57
COL9A1-207ENST00000486080 FBP1P09467 338 aa11.48□□□□□ -0.57
COL9A1-207ENST00000486080 OR8G2PQ6IF36 304 aa11.48□□□□□ -0.57
COL9A1-207ENST00000486080 TMEM219Q86XT9 240 aa11.48□□□□□ -0.57
COL9A1-207ENST00000486080 ST8SIA2Q92186 375 aa11.48□□□□□ -0.57
COL9A1-207ENST00000486080 PMS2P5A8MQ11 134 aa11.47□□□□□ -0.57
COL9A1-207ENST00000486080 APELAP0DMC3 54 aa11.47□□□□□ -0.57
COL9A1-207ENST00000486080 MAS1LP35410 378 aa11.47□□□□□ -0.57
COL9A1-207ENST00000486080 RPL27AP46776 148 aaKnown RBP11.47□□□□□ -0.57
COL9A1-207ENST00000486080 WT1-ASQ06250 92 aa11.47□□□□□ -0.57
COL9A1-207ENST00000486080 ZNF680Q8NEM1 530 aa11.47□□□□□ -0.57
COL9A1-207ENST00000486080 EXOSC2Q13868 293 aaKnown RBP11.46□□□□□ -0.57
COL9A1-207ENST00000486080 LRRC75BQ2VPJ9 315 aa11.46□□□□□ -0.57
COL9A1-207ENST00000486080 DEFB112Q30KQ8 113 aa11.46□□□□□ -0.57
COL9A1-207ENST00000486080 Q8N9W7 124 aa11.46□□□□□ -0.57
COL9A1-207ENST00000486080 OR1S2Q8NGQ3 325 aa11.46□□□□□ -0.57
COL9A1-207ENST00000486080 SONP18583 2426 aaKnown RBP11.46□□□□□ -0.57
COL9A1-207ENST00000486080 H3BUX3 64 aa11.46□□□□□ -0.58
COL9A1-207ENST00000486080 RGS13O14921 159 aa11.46□□□□□ -0.58
COL9A1-207ENST00000486080 CNIH1O95406 144 aa11.46□□□□□ -0.58
COL9A1-207ENST00000486080 LY86O95711 162 aa11.46□□□□□ -0.58
COL9A1-207ENST00000486080 REG1AP05451 166 aa11.46□□□□□ -0.58
COL9A1-207ENST00000486080 BPIFB3P59826 476 aa11.46□□□□□ -0.58
COL9A1-207ENST00000486080 UBA52P62987 128 aaKnown RBP11.46□□□□□ -0.58
COL9A1-207ENST00000486080 LY6EQ16553 131 aa11.46□□□□□ -0.58
COL9A1-207ENST00000486080 ALKAL2Q6UX46 152 aa11.46□□□□□ -0.58
COL9A1-207ENST00000486080 IL17RELQ6ZVW7 336 aa11.46□□□□□ -0.58
COL9A1-207ENST00000486080 SLC24A4Q8NFF2 622 aa11.46□□□□□ -0.58
COL9A1-207ENST00000486080 SRSF12Q8WXF0 261 aaKnown RBP11.46□□□□□ -0.58
COL9A1-207ENST00000486080 IGLC7A0M8Q6 106 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 TEX22C9J3V5 150 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 OR8U8P0C7N1 319 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 OR13C7P0DN81 318 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 AREGP15514 252 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 NPY1RP25929 384 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 RPP30P78346 268 aaKnown RBP11.45□□□□□ -0.58
COL9A1-207ENST00000486080 SLC38A11Q08AI6 406 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 FXYD3Q14802 87 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 STPG2Q8N412 459 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 STOML3Q8TAV4 291 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 C1RLQ9NZP8 487 aa11.45□□□□□ -0.58
COL9A1-207ENST00000486080 A0A1W2PN81 502 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 SH2D7A6NKC9 451 aaPredicted RBP11.44□□□□□ -0.58
COL9A1-207ENST00000486080 INS-IGF2F8WCM5 200 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 RNASE2P10153 161 aaKnown RBP11.44□□□□□ -0.58
COL9A1-207ENST00000486080 CHRNA7P36544 502 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 HBG1P69891 147 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 HBG2P69892 147 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 CX3CL1P78423 397 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 BSXQ3C1V8 233 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 ETV3LQ6ZN32 361 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 C19orf35Q6ZS72 473 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 BAP18Q8IXM2 172 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 SSMEM1Q8WWF3 244 aa11.44□□□□□ -0.58
COL9A1-207ENST00000486080 RBM14Q96PK6 669 aaKnown RBP11.44□□□□□ -0.58
COL9A1-207ENST00000486080 ATP5SQ99766 215 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms