RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 MRPL28Q13084 256 aaKnown RBP4.63□□□□□ -1.67
SMC4-217ENST00000485867 LEMD1Q68G75 181 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 KDM4DQ6B0I6 523 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 LHFPL3Q86UP9 236 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 ARHGAP24Q8N264 748 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 JAGN1Q8N5M9 183 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 OR2A7Q96R45 310 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 C20orf24Q9BUV8 137 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 YTHDF1Q9BYJ9 559 aaKnown RBP4.63□□□□□ -1.67
SMC4-217ENST00000485867 OR2D2Q9H210 308 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 IMPAD1Q9NX62 359 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 RDH8Q9NYR8 311 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 SMPXQ9UHP9 88 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 TBC1D24Q9ULP9 559 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 AQP12BA6NM10 295 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 NDUFA4O00483 81 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 CHEK1O14757 476 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 FKBP6O75344 327 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 REG1AP05451 166 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 ZNF735P0CB33 412 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 SPP1P10451 314 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 DEFB131AP59861 70 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 TPBGQ13641 420 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 OR2G6Q5TZ20 316 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 FAM90A2PQ658T7 463 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 XAF1Q6GPH4 301 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 TRPT1Q86TN4 253 aaKnown RBP4.62□□□□□ -1.67
SMC4-217ENST00000485867 STHQ8IWL8 128 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 AQP12AQ8IXF9 295 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 GBGT1Q8N5D6 347 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 CSNK1G2-AS1Q8NCQ2 148 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 ZNRF2Q8NHG8 242 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 LGALS12Q96DT0 336 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 HDHD3Q9BSH5 251 aaPredicted RBP4.62□□□□□ -1.67
SMC4-217ENST00000485867 RHPN1-AS1Q9BWJ2 59 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 TM2D2Q9BX73 214 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 TMEM14BQ9NUH8 114 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 CLEC5AQ9NY25 188 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 AASSQ9UDR5 926 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 EXOGQ9Y2C4 368 aaKnown RBP4.62□□□□□ -1.67
SMC4-217ENST00000485867 TMED3Q9Y3Q3 217 aa4.62□□□□□ -1.67
SMC4-217ENST00000485867 TRBV5-7A0A0A0MS05 114 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 IGHV3-49A0A0A0MS15 119 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 IGLV5-39A0A0G2JS06 123 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 IGHV7-4-1A0A0J9YVY3 117 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 TRBV5-5A0A0J9YX44 114 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 OR2T8A6NH00 312 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 C15orf62A8K5M9 175 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 DFFBO76075 338 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 KBTBD11O94819 623 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 DEFA4P12838 97 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 BTF3P20290 206 aaKnown RBP4.61□□□□□ -1.67
SMC4-217ENST00000485867 PTBP1P26599 531 aaKnown RBP eCLIP4.61□□□□□ -1.67
SMC4-217ENST00000485867 DUTP33316 252 aaKnown RBP4.61□□□□□ -1.67
SMC4-217ENST00000485867 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 TMEM88Q6PEY1 159 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 FAM24BQ8N5W8 94 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 OR6M1Q8NGM8 313 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 GIMAP1Q8WWP7 306 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 ZNF414Q96IQ9 312 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 ADTRPQ96IZ2 230 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 C17orf77Q96MU5 243 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 MYCBPQ99417 103 aaPredicted RBP4.61□□□□□ -1.67
SMC4-217ENST00000485867 CIB1Q99828 191 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 GABARAPL3Q9BY60 117 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 GABARAPL1Q9H0R8 117 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 OR51E2Q9H255 320 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 Q9N2K0 584 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 SMPD3Q9NY59 655 aaPredicted RBP4.61□□□□□ -1.67
SMC4-217ENST00000485867 MGAT4AQ9UM21 535 aa4.61□□□□□ -1.67
SMC4-217ENST00000485867 MBPP02686 304 aaPredicted RBP4.6□□□□□ -1.67
SMC4-217ENST00000485867 SMR3BP02814 79 aaPredicted RBP4.6□□□□□ -1.67
SMC4-217ENST00000485867 CD3GP09693 182 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 SPART-AS1P0CW21 52 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 HTR2CP28335 458 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 MAS1LP35410 378 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 PSMD7P51665 324 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 ARFRP1Q13795 201 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 OR10K2Q6IF99 312 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 RPL22L1Q6P5R6 122 aaKnown RBP4.6□□□□□ -1.67
SMC4-217ENST00000485867 SPSB3Q6PJ21 355 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 CDH26Q8IXH8 852 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 VKORC1L1Q8N0U8 176 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 PUSL1Q8N0Z8 303 aaKnown RBP4.6□□□□□ -1.67
SMC4-217ENST00000485867 TMEM116Q8NCL8 245 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 TMEM167AQ8TBQ9 72 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 VN1R17PQ8TDU5 208 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 BSCL2Q96G97 398 aaPredicted RBP4.6□□□□□ -1.67
SMC4-217ENST00000485867 CMTM3Q96MX0 182 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 ATG101Q9BSB4 218 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 TM2D1Q9BX74 207 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 RIMS4Q9H426 269 aaPredicted RBP4.6□□□□□ -1.67
SMC4-217ENST00000485867 CKLFQ9UBR5 152 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 AK3Q9UIJ7 227 aa4.6□□□□□ -1.67
SMC4-217ENST00000485867 IGHV3OR16-13A0A075B7E8 117 aa4.59□□□□□ -1.67
SMC4-217ENST00000485867 A0A0A6YYD4 124 aa4.59□□□□□ -1.67
SMC4-217ENST00000485867 IGHV3-74A0A0B4J1X5 117 aa4.59□□□□□ -1.67
SMC4-217ENST00000485867 TRAV2A0A0B4J234 112 aa4.59□□□□□ -1.67
SMC4-217ENST00000485867 TCRBV3S1A0A5B6 114 aa4.59□□□□□ -1.67
SMC4-217ENST00000485867 IGLC7A0M8Q6 106 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms