RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 EIF4EBP1Q13541 118 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-208ENST00000481484 HAGHQ16775 308 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 MRGPRG-AS1Q2M3A8 158 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 CD300EQ496F6 205 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-208ENST00000481484 UBE2NLQ5JXB2 153 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM69Q5SWH9 247 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 AADACL3Q5VUY0 350 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF57Q68EA5 555 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-208ENST00000481484 IL34Q6ZMJ4 242 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 IDO2Q6ZQW0 420 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 C5orf24Q7Z6I8 188 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 HAPLN4Q86UW8 402 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 NR2C2APQ86WQ0 139 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 CMTM1Q8IZ96 169 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 SLC38A6Q8IZM9 456 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 SPARTQ8N0X7 666 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM217Q8N7C4 229 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 OR5AP2Q8NGF4 316 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 OR5B3Q8NH48 314 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 VN1R17PQ8TDU5 208 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 SECTM1Q8WVN6 248 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 MAFIPQ8WZ33 124 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM190Q8WZ59 177 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 LSM10Q969L4 123 aaKnown RBP3.13□□□□□ -1.91
VPS13D-208ENST00000481484 SLC25A38Q96DW6 304 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 CYYR1Q96J86 154 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 ST6GALNAC5Q9BVH7 336 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 GGTLC1Q9BX51 225 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 C6orf62Q9GZU0 229 aaPredicted RBP3.13□□□□□ -1.91
VPS13D-208ENST00000481484 SRD5A3Q9H8P0 318 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 PLEKHA3Q9HB20 300 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 HRASLSQ9HDD0 168 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 DAZ1Q9NQZ3 744 aaKnown RBP3.13□□□□□ -1.91
VPS13D-208ENST00000481484 TAS2R8Q9NYW2 309 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 PRNDQ9UKY0 176 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 ANAPC10Q9UM13 185 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 SPATA2Q9UM82 520 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 TP53TG1Q9Y2A0 90 aa3.13□□□□□ -1.91
VPS13D-208ENST00000481484 RRP15Q9Y3B9 282 aaKnown RBP3.13□□□□□ -1.91
VPS13D-208ENST00000481484 IGKV1D-8A0A087WSZ0 117 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 KIR2DL5BA0A0G2JN68 375 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 KIR2DL5BA0A0G2JPC4 375 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 LOC100506127A0A0U1RQW1 187 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 IGLC7A0M8Q6 106 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 NUPR2A6NF83 97 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 OR4C46A6NHA9 309 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 OR11H12B2RN74 326 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 NDUFA4O00483 81 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 UBE2CO00762 179 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 TGOLN2O43493 480 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 XRCC3O43542 346 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 SSX5O60225 188 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 OR2J3O76001 311 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 ATG12O94817 140 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 ATP6V1G2O95670 118 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 IGLV2-14P01704 120 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 IL6RP08887 468 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-208ENST00000481484 RPA2P15927 270 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 TBPP20226 339 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 F2RP25116 425 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 PTBP1P26599 531 aaKnown RBP eCLIP3.12□□□□□ -1.91
VPS13D-208ENST00000481484 FCGR2CP31995 323 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 SDC2P34741 201 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 CMC4P56277 68 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-208ENST00000481484 OR2B8PP59922 312 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 DEFA5Q01523 94 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 RELQ04864 619 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-208ENST00000481484 PLA2G7Q13093 441 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 GUCA2BQ16661 112 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 DEFB114Q30KQ6 69 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 OR2B11Q5JQS5 317 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 C10orf55Q5SWW7 151 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 LAMTOR1Q6IAA8 161 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 LPCAT3Q6P1A2 487 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 LINC00322Q6ZN03 302 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-208ENST00000481484 RBPMS2Q6ZRY4 209 aaKnown RBP3.12□□□□□ -1.91
VPS13D-208ENST00000481484 Q6ZWC4 215 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM17Q86X19 198 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM61Q8N0U2 210 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 SPAG16Q8N0X2 631 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 KIR2DL5AQ8N109 375 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF114Q8NC26 417 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 DMBX1Q8NFW5 382 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 TSPAN14Q8NG11 270 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 OR52B4Q8NGK2 314 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 OR1L8Q8NGR8 309 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 OR5H2Q8NGV7 314 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 KIR2DL5BQ8NHK3 375 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF502Q8TBZ5 544 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 GIMAP1Q8WWP7 306 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 MOB3AQ96BX8 217 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM56Q96MV1 263 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 CMTM3Q96MX0 182 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 ZNF436Q9C0F3 470 aaPredicted RBP3.12□□□□□ -1.91
VPS13D-208ENST00000481484 SLC5A7Q9GZV3 580 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 HIPK2Q9H2X6 1198 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 C5orf66Q9H5L9 145 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 AUNIPQ9H7T9 357 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 SCPEP1Q9HB40 452 aa3.12□□□□□ -1.91
VPS13D-208ENST00000481484 TMEM140Q9NV12 185 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms