RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 OR52B4Q8NGK2 314 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 RAB2BQ8WUD1 216 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 GIMAP1Q8WWP7 306 aa11.46□□□□□ -0.57
LIMS3-203ENST00000480744 RBM38Q9H0Z9 239 aaKnown RBP11.46□□□□□ -0.57
LIMS3-203ENST00000480744 IGLC7A0M8Q6 106 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 A8MWP6 167 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 TAS2R20P59543 309 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 ERVK-16P61578 105 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 KLK9Q2XQG4 91 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 TM4SF20Q53R12 229 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 BTNL8Q6UX41 500 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 UNQ9165/PRO28630Q6UXU0 137 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 OR10W1Q8NGF6 305 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 DYNC2LI1Q8TCX1 351 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 S100A16Q96FQ6 103 aaKnown RBP11.45□□□□□ -0.58
LIMS3-203ENST00000480744 QTRT1Q9BXR0 403 aaKnown RBP11.45□□□□□ -0.58
LIMS3-203ENST00000480744 THYN1Q9P016 225 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 KLK9Q9UKQ9 250 aa11.45□□□□□ -0.58
LIMS3-203ENST00000480744 PMP2P02689 132 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 RLN1P04808 185 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 ZNF182P17025 639 aaPredicted RBP11.44□□□□□ -0.58
LIMS3-203ENST00000480744 POU2AF1Q16633 256 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 ZNF585BQ52M93 769 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 PLET1Q6UQ28 207 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 IL17DQ8TAD2 202 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 ZNF502Q8TBZ5 544 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 CD300LFQ8TDQ1 290 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 BORCS5Q969J3 196 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 BCL7BQ9BQE9 202 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 HINT2Q9BX68 163 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 MIXL1Q9H2W2 232 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 PLEKHA2Q9HB19 425 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 COMMD9Q9P000 198 aa11.44□□□□□ -0.58
LIMS3-203ENST00000480744 CYB5BO43169 146 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 APOA1P02647 267 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 TRAPPC2P0DI81 140 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 TRAPPC2BP0DI82 140 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 OR13C7P0DN81 318 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 GNRHRP30968 328 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 RFX2P48378 723 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 ANKRD55Q3KP44 614 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 TMEM69Q5SWH9 247 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 RBPMS2Q6ZRY4 209 aaKnown RBP11.43□□□□□ -0.58
LIMS3-203ENST00000480744 OR5H2Q8NGV7 314 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 SRSF8Q9BRL6 282 aaKnown RBP11.43□□□□□ -0.58
LIMS3-203ENST00000480744 ZNF2Q9BSG1 426 aaPredicted RBP11.43□□□□□ -0.58
LIMS3-203ENST00000480744 UFC1Q9Y3C8 167 aa11.43□□□□□ -0.58
LIMS3-203ENST00000480744 TEX50A0A1B0GTY4 177 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 JTBO76095 146 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 PTBP1P26599 531 aaKnown RBP eCLIP11.42□□□□□ -0.58
LIMS3-203ENST00000480744 LPAR6P43657 344 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 SLC25A24Q6NUK1 477 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 GDPD1Q8N9F7 314 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 OR1L8Q8NGR8 309 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 MARC2Q969Z3 335 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 MOB3AQ96BX8 217 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 GGTLC1Q9BX51 225 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 CCDC59Q9P031 241 aaKnown RBP11.42□□□□□ -0.58
LIMS3-203ENST00000480744 ANAPC10Q9UM13 185 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 DNAH1Q9P2D7 4330 aa11.42□□□□□ -0.58
LIMS3-203ENST00000480744 IGHV3-21A0A0B4J1V1 117 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 OR2T8A6NH00 312 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 MARCH11A6NNE9 402 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 CTDSP2O14595 271 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 TGOLN2O43493 480 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 PGLYRP1O75594 196 aaPredicted RBP11.41□□□□□ -0.58
LIMS3-203ENST00000480744 KRASP01116 189 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 F2RP25116 425 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 TAS2R46P59540 309 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 WT1-ASQ06250 92 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 THOC7Q6I9Y2 204 aaKnown RBP11.41□□□□□ -0.58
LIMS3-203ENST00000480744 MZT2AQ6P582 158 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 OR1L6Q8NGR2 347 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 VN1R17PQ8TDU5 208 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 AP3S1Q92572 193 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 CMTM3Q96MX0 182 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 SLIRPQ9GZT3 109 aaKnown RBP11.41□□□□□ -0.58
LIMS3-203ENST00000480744 MRPL27Q9P0M9 148 aaKnown RBP11.41□□□□□ -0.58
LIMS3-203ENST00000480744 NSG2Q9Y328 171 aa11.41□□□□□ -0.58
LIMS3-203ENST00000480744 LOC102724200A0A096LPH7 203 aaPredicted RBP11.4□□□□□ -0.58
LIMS3-203ENST00000480744 TRAV25A0A0B4J276 109 aa11.4□□□□□ -0.58
LIMS3-203ENST00000480744 SNAPC5O75971 98 aa11.4□□□□□ -0.58
LIMS3-203ENST00000480744 SERPINE2P07093 398 aa11.4□□□□□ -0.58
LIMS3-203ENST00000480744 G6PCP35575 357 aa11.4□□□□□ -0.58
LIMS3-203ENST00000480744 ELLP55199 621 aaPredicted RBP11.4□□□□□ -0.58
LIMS3-203ENST00000480744 DHRS11Q6UWP2 260 aa11.4□□□□□ -0.58
LIMS3-203ENST00000480744 HSD17B13Q7Z5P4 300 aaPredicted RBP11.4□□□□□ -0.58
LIMS3-203ENST00000480744 SNX29P2Q8IUI4 249 aa11.4□□□□□ -0.58
LIMS3-203ENST00000480744 CMTM1Q8IZ96 169 aa11.4□□□□□ -0.58
LIMS3-203ENST00000480744 FCAMRQ8WWV6 532 aa11.4□□□□□ -0.58
LIMS3-203ENST00000480744 DGCR14Q96DF8 476 aaKnown RBP11.4□□□□□ -0.58
LIMS3-203ENST00000480744 ZNF436Q9C0F3 470 aaPredicted RBP11.4□□□□□ -0.58
LIMS3-203ENST00000480744 FXYD6Q9H0Q3 95 aa11.4□□□□□ -0.58
LIMS3-203ENST00000480744 OR51B2Q9Y5P1 312 aa11.4□□□□□ -0.58
LIMS3-203ENST00000480744 HYDINQ4G0P3 5121 aa11.4□□□□□ -0.59
LIMS3-203ENST00000480744 EPPK1P58107 5090 aaKnown RBP11.39□□□□□ -0.59
LIMS3-203ENST00000480744 FAM25AB3EWG3 89 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 FAM25CB3EWG5 89 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 FAM25GB3EWG6 89 aa11.39□□□□□ -0.59
LIMS3-203ENST00000480744 GPR31O00270 319 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms