RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 FAM24AA6NFZ4 105 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 FGF16O43320 207 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 GPR137BO60478 399 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 TAS2R30P59541 319 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 CX3CL1P78423 397 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 FXYD3Q14802 87 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 ZNF562Q6V9R5 426 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 C16orf82Q7Z2V1 217 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 OR10W1Q8NGF6 305 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 CIB3Q96Q77 187 aaPredicted RBP13.95□□□□□ -0.18
UPF3A-206ENST00000480362 HIPK2Q9H2X6 1198 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 PLEKHA3Q9HB20 300 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 HEYLQ9NQ87 328 aaPredicted RBP13.95□□□□□ -0.18
UPF3A-206ENST00000480362 WSB1Q9Y6I7 421 aa13.95□□□□□ -0.18
UPF3A-206ENST00000480362 SH2D7A6NKC9 451 aaPredicted RBP13.94□□□□□ -0.18
UPF3A-206ENST00000480362 HLA-DRB1P01911 266 aa13.94□□□□□ -0.18
UPF3A-206ENST00000480362 AMY1AP04745 511 aa13.94□□□□□ -0.18
UPF3A-206ENST00000480362 NUP62P37198 522 aaPredicted RBP13.94□□□□□ -0.18
UPF3A-206ENST00000480362 CAV2P51636 162 aa13.94□□□□□ -0.18
UPF3A-206ENST00000480362 INO80EQ8NBZ0 244 aaPredicted RBP13.94□□□□□ -0.18
UPF3A-206ENST00000480362 SRSF12Q8WXF0 261 aaKnown RBP13.94□□□□□ -0.18
UPF3A-206ENST00000480362 MFFQ9GZY8 342 aa13.94□□□□□ -0.18
UPF3A-206ENST00000480362 CDC42EP3Q9UKI2 254 aa13.94□□□□□ -0.18
UPF3A-206ENST00000480362 IGHV7-81A0A0B4J1V7 117 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 A0A1W2PN81 502 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 MSGN1A6NI15 193 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 H3BP45 60 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 LY86O95711 162 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 HKR1P10072 659 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 SRD5A1P18405 259 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 CXCL2P19875 107 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 RPL12P30050 165 aaKnown RBP13.93□□□□□ -0.18
UPF3A-206ENST00000480362 CHRNA7P36544 502 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 AP2S1P53680 142 aaPredicted RBP13.93□□□□□ -0.18
UPF3A-206ENST00000480362 SCGB2A2Q13296 93 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 LGALSLQ3ZCW2 172 aaPredicted RBP13.93□□□□□ -0.18
UPF3A-206ENST00000480362 SPANXN5Q5MJ07 72 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 RBMS3Q6XE24 437 aaKnown RBP13.93□□□□□ -0.18
UPF3A-206ENST00000480362 ACOT7LQ6ZUV0 252 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 OR2C3Q8N628 320 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 HSPB9Q9BQS6 159 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 LYRM2Q9NU23 88 aaPredicted RBP13.93□□□□□ -0.18
UPF3A-206ENST00000480362 VPREB3Q9UKI3 123 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 ACANP16112 2415 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 MAST4O15021 2626 aa13.93□□□□□ -0.18
UPF3A-206ENST00000480362 RNF222A6NCQ9 220 aa13.92□□□□□ -0.18
UPF3A-206ENST00000480362 M0QZK8 103 aa13.92□□□□□ -0.18
UPF3A-206ENST00000480362 TSC22D2O75157 780 aa13.92□□□□□ -0.18
UPF3A-206ENST00000480362 LAMTOR1Q6IAA8 161 aa13.92□□□□□ -0.18
UPF3A-206ENST00000480362 C9orf62Q8N4C0 152 aa13.92□□□□□ -0.18
UPF3A-206ENST00000480362 ARPC1AQ92747 370 aa13.92□□□□□ -0.18
UPF3A-206ENST00000480362 AQP10Q96PS8 301 aa13.92□□□□□ -0.18
UPF3A-206ENST00000480362 TNCP24821 2201 aa13.92□□□□□ -0.18
UPF3A-206ENST00000480362 OTOGQ6ZRI0 2925 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 IGSF23A1L1A6 192 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 TEX22C9J3V5 150 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 INAFM1C9JVW0 142 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 INS-IGF2F8WCM5 200 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 IFNA10P01566 189 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 ERHP84090 104 aaKnown RBP13.91□□□□□ -0.18
UPF3A-206ENST00000480362 WT1-ASQ06250 92 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 TMEM86BQ8N661 226 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 TMEM252Q8N6L7 170 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 ABHD5Q8WTS1 349 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 OR4C12Q96R67 309 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 FAM103A1Q9BTL3 118 aaKnown RBP13.91□□□□□ -0.18
UPF3A-206ENST00000480362 SLC25A31Q9H0C2 315 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 ZC4H2Q9NQZ6 224 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 PAIP2BQ9ULR5 123 aaKnown RBP13.91□□□□□ -0.18
UPF3A-206ENST00000480362 STRAPQ9Y3F4 350 aaKnown RBP13.91□□□□□ -0.18
UPF3A-206ENST00000480362 U3KQ87 197 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 SVEP1Q4LDE5 3571 aa13.91□□□□□ -0.18
UPF3A-206ENST00000480362 IGLC7A0M8Q6 106 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 LINC01548A6NM66 108 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 APELAP0DMC3 54 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 OR13C7P0DN81 318 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 BLCAPP62952 87 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 RPP30P78346 268 aaKnown RBP13.9□□□□□ -0.18
UPF3A-206ENST00000480362 NDPQ00604 133 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 NHLH2Q02577 135 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 TMEM267Q0VDI3 215 aaPredicted RBP13.9□□□□□ -0.18
UPF3A-206ENST00000480362 OR2F1Q13607 317 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 C9orf152Q5JTZ5 239 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 TMEM14EPQ6UXP3 125 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 MRPL41Q8IXM3 137 aaKnown RBP13.9□□□□□ -0.18
UPF3A-206ENST00000480362 DUX5Q96PT3 197 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 HSPB11Q9Y547 144 aa13.9□□□□□ -0.18
UPF3A-206ENST00000480362 A0A0D9SG52 128 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 C15orf62A8K5M9 175 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 PLXNB1O43157 2135 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 REG1AP05451 166 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 METTL15P1P0C7V9 234 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 EGR2P11161 476 aaPredicted RBP13.89□□□□□ -0.19
UPF3A-206ENST00000480362 AREGP15514 252 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 SNCAP37840 140 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 EWSR1Q01844 656 aaKnown RBP eCLIP13.89□□□□□ -0.19
UPF3A-206ENST00000480362 TMUB2Q71RG4 321 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 HSD17B13Q7Z5P4 300 aaPredicted RBP13.89□□□□□ -0.19
UPF3A-206ENST00000480362 KCNRGQ8N5I3 272 aa13.89□□□□□ -0.19
UPF3A-206ENST00000480362 SLC24A4Q8NFF2 622 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms