RNA–Protein interactions for RNA: ENST00000479965.5

CCDC88B-207, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 3,102 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-207ENST00000479965 CAMPP49913 170 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 MFAP2P55001 183 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 TEPPQ6URK8 271 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 OR4F17Q8NGA8 305 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 SSBP4Q9BWG4 385 aaPredicted RBP15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 IL19Q9UHD0 177 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 NCKAP5O14513 1909 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 IGFBP2P18065 325 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 EDDM3AQ14507 147 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 SMIM15Q7Z3B0 74 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 OR5B3Q8NH48 314 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 FAM168AQ92567 244 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 C11orf52Q96A22 123 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 CST9LQ9H4G1 147 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 GP6Q9HCN6 339 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 OOEPA6NGQ2 149 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 ZNF891A8MT65 544 aaPredicted RBP15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 CELA3AP09093 270 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 CCL4P13236 92 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 GATA2P23769 480 aaPredicted RBP15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 DUSP3P51452 185 aaPredicted RBP15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 SELENOVP59797 346 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 FOXF2Q12947 444 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 KIR3DL3Q8N743 410 aa15.54■□□□□ 0.08
CCDC88B-207ENST00000479965 TRAV30A0A087WSZ9 112 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 OR2T8A6NH00 312 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 NUDT3O95989 172 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 UBE2G1P62253 170 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 EIF4EBP1Q13541 118 aaPredicted RBP15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 C3AR1Q16581 482 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 Q8IYB0 196 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 TECRQ9NZ01 308 aaKnown RBP15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 SELENOKQ9Y6D0 94 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 KMT2EQ8IZD2 1858 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 GFRA3O60609 400 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 GPR12P47775 334 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 RAB31Q13636 194 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 OR1C1Q15619 314 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 NRN1LQ496H8 165 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 SPINK14Q6IE38 97 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 OR8B2Q96RD0 313 aa15.53■□□□□ 0.08
CCDC88B-207ENST00000479965 SS18L1O75177 396 aaPredicted RBP15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 CA7P43166 264 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 ERVK-16P61578 105 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 PRR27Q6MZM9 219 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 MUC15Q8N387 334 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 NEUROG1Q92886 237 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 ZNF355PQ9NSJ1 428 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 H0Y8G0 127 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 M0R1X1 148 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 ZNF146Q15072 292 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 OCIAD2Q56VL3 154 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 WDR54Q9H977 334 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 OSTCQ9NRP0 149 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 TIMM8BQ9Y5J9 83 aaPredicted RBP15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 LY96Q9Y6Y9 160 aa15.52■□□□□ 0.08
CCDC88B-207ENST00000479965 ADAMTS20P59510 1910 aa15.52■□□□□ 0.07
CCDC88B-207ENST00000479965 TNRC6AQ8NDV7 1962 aaKnown RBP15.52■□□□□ 0.07
CCDC88B-207ENST00000479965 SH2D7A6NKC9 451 aaPredicted RBP15.52■□□□□ 0.07
CCDC88B-207ENST00000479965 PNKDQ8N490 385 aa15.52■□□□□ 0.07
CCDC88B-207ENST00000479965 OR13A1Q8NGR1 328 aa15.52■□□□□ 0.07
CCDC88B-207ENST00000479965 C1orf159Q96HA4 380 aa15.52■□□□□ 0.07
CCDC88B-207ENST00000479965 LINC00479Q96M42 142 aa15.52■□□□□ 0.07
CCDC88B-207ENST00000479965 GSX1Q9H4S2 264 aaPredicted RBP15.52■□□□□ 0.07
CCDC88B-207ENST00000479965 LINC00869P0C866 280 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 ERVK11-1P61568 191 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 AMMECR1LQ6DCA0 310 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 Q6ZR03 302 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 SPACA3Q8IXA5 215 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 TMEM45BQ96B21 275 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 OBP2BQ9NPH6 170 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 GNG12Q9UBI6 72 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 A0A1W2PN81 502 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 ZNF784Q8NCA9 323 aaPredicted RBP15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 OR2T6Q8NHC8 308 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 ZC2HC1AQ96GY0 325 aa15.51■□□□□ 0.07
CCDC88B-207ENST00000479965 COX19Q49B96 90 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 SPATA12Q7Z6I5 190 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 COQ2Q96H96 371 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 hDV102S1A0JD36 115 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 MDP1Q86V88 176 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 CDX2Q99626 313 aaPredicted RBP15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 TCF19Q9Y242 345 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 CER1O95813 267 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 AREGP15514 252 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 FOLR3P41439 243 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 VDAC2P45880 294 aaPredicted RBP15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 RPL39P5Q59GN2 51 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 OR2Y1Q8NGV0 311 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 METRNQ9UJH8 293 aa15.5■□□□□ 0.07
CCDC88B-207ENST00000479965 AHCTF1Q8WYP5 2266 aa15.49■□□□□ 0.07
CCDC88B-207ENST00000479965 OR4C46A6NHA9 309 aa15.49■□□□□ 0.07
CCDC88B-207ENST00000479965 GGTLC3B5MD39 225 aa15.49■□□□□ 0.07
CCDC88B-207ENST00000479965 ISLRO14498 428 aa15.49■□□□□ 0.07
CCDC88B-207ENST00000479965 REG1AP05451 166 aa15.49■□□□□ 0.07
CCDC88B-207ENST00000479965 BPIFB3P59826 476 aa15.49■□□□□ 0.07
CCDC88B-207ENST00000479965 MOB3BQ86TA1 216 aa15.49■□□□□ 0.07
CCDC88B-207ENST00000479965 Q8TCH9 128 aa15.49■□□□□ 0.07
CCDC88B-207ENST00000479965 BCL2L2Q92843 193 aaPredicted RBP15.49■□□□□ 0.07
CCDC88B-207ENST00000479965 MCRIP2Q9BUT9 160 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms