RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 A8MU10 97 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF670-ZNF695F2Z2N8 137 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 TRAPPC2LH3BP13 241 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 MPZL2O60487 215 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 SLC2A1P11166 492 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 MUC1P15941 1255 aaPredicted RBP3.51□□□□□ -1.85
UPF3A-205ENST00000479712 CCL1P22362 96 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 PMELP40967 661 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 SPRNQ5BIV9 151 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF684Q5T5D7 378 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 TMEM236Q5W0B7 351 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 TMEM42Q69YG0 159 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF322Q6U7Q0 402 aaPredicted RBP3.51□□□□□ -1.85
UPF3A-205ENST00000479712 LRRN1Q6UXK5 716 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 PLEKHG7Q6ZR37 379 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 LINC00173Q6ZV60 143 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 CMTM1Q8IZ96 169 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR5AS1Q8N127 324 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR1M1Q8NGA1 313 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR10AD1Q8NGE0 317 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR8B12Q8NGG6 310 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR8B3Q8NGG8 313 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR5A2Q8NGI9 324 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR2T27Q8NH04 317 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR8S1Q8NH09 359 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR2AE1Q8NHA4 323 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 THEM6Q8WUY1 208 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR5P3Q8WZ94 311 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 MRPL48Q96GC5 212 aaKnown RBP3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR5B12Q96R08 314 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR8B2Q96RD0 313 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 C9orf16Q9BUW7 83 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 RTL8AQ9BWD3 113 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 FAM206AQ9NX38 181 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 OR5V1Q9UGF6 321 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 INSIG2Q9Y5U4 225 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 F11RQ9Y624 299 aaKnown RBP3.51□□□□□ -1.85
UPF3A-205ENST00000479712 R4GMQ9 66 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 A6NDX4 124 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 METTL15A6NJ78 407 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 C16orf90A8MZG2 172 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 TEX46H3BTG2 121 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 J3QRE1 110 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 ENSAO43768 121 aaKnown RBP3.5□□□□□ -1.85
UPF3A-205ENST00000479712 NOS1APO75052 506 aaPredicted RBP3.5□□□□□ -1.85
UPF3A-205ENST00000479712 DHRS3O75911 302 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 TTRP02766 147 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 HLA-DPB1P04440 258 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 STAG3L3P0CL85 134 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 TGM4P49221 684 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 CXCR4P61073 352 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 GNG3P63215 75 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 PRDX4Q13162 271 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 MPPED2Q15777 294 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 ZSCAN26Q16670 478 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 CEACAM21Q3KPI0 293 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 C2orf83Q53S99 150 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 LPCAT4Q643R3 524 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 WDR82Q6UXN9 313 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 SYS1Q8N2H4 156 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 CBR4Q8N4T8 237 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 PACRGLQ8N7B6 248 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 Q8N9W7 124 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF420Q8TAQ5 688 aaPredicted RBP3.5□□□□□ -1.85
UPF3A-205ENST00000479712 PYDC1Q8WXC3 89 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 Q96MT0 163 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 TM2D3Q9BRN9 247 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 PBOV1Q9GZY1 135 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 RASL12Q9NYN1 266 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 UBAP1Q9NZ09 502 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 CLN8Q9UBY8 286 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 MRM2Q9UI43 246 aaKnown RBP3.5□□□□□ -1.85
UPF3A-205ENST00000479712 ENPP5Q9UJA9 477 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 TBC1D24Q9ULP9 559 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 SLC22A13Q9Y226 551 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 RHBDD3Q9Y3P4 386 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 V9GYS6 101 aa3.5□□□□□ -1.85
UPF3A-205ENST00000479712 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 A0A1B0GTI1 187 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 A0A1W2PQL4 384 aaPredicted RBP3.49□□□□□ -1.85
UPF3A-205ENST00000479712 IRGMA1A4Y4 181 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 H0Y9J4 135 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 PANO1I0J062 215 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 J3QT63 122 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 GATBO75879 557 aaKnown RBP3.49□□□□□ -1.85
UPF3A-205ENST00000479712 FADS2O95864 444 aaKnown RBP3.49□□□□□ -1.85
UPF3A-205ENST00000479712 CYB5R3P00387 301 aaPredicted RBP3.49□□□□□ -1.85
UPF3A-205ENST00000479712 NRASP01111 189 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 ISG15P05161 165 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 MRPL3P09001 348 aaKnown RBP3.49□□□□□ -1.85
UPF3A-205ENST00000479712 UBCP0CG48 685 aaKnown RBP3.49□□□□□ -1.85
UPF3A-205ENST00000479712 DUX4L4P0CJ87 422 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 DNAH10OSP0CZ25 163 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 HRH1P35367 487 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 POLR2IP36954 125 aaKnown RBP3.49□□□□□ -1.85
UPF3A-205ENST00000479712 NMUP48645 174 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 CAV3P56539 151 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 PAX5Q02548 391 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 CLVS2Q5SYC1 327 aa3.49□□□□□ -1.85
UPF3A-205ENST00000479712 LELP1Q5T871 98 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms