RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CEACAM3P40198 252 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 SULT1A1P50225 295 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 SULT1A2P50226 295 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 UBE2E1P51965 193 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 HLA-DRB3P79483 266 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 HTD2P86397 168 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 SRSF7Q16629 238 aaKnown RBP eCLIP5.02□□□□□ -1.61
SF3B1-209ENST00000479532 IQCJQ1A5X6 159 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 C17orf58Q2M2W7 97 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 C1orf194Q5T5A4 169 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 TMEM268Q5VZI3 342 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 LEMD1Q68G75 181 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 ZNF880Q6PDB4 577 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 TCF23Q7RTU1 214 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 ABHD12Q8N2K0 398 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 PNKDQ8N490 385 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 Q8N7P7 452 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 OR52M1Q8NGK5 317 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 OR10D4PQ8NGN7 298 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 ZNF596Q8TC21 504 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 ORAOV1Q8WV07 137 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 IL1F10Q8WWZ1 152 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 TBX15Q96SF7 602 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 MLST8Q9BVC4 326 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 ST6GALNAC5Q9BVH7 336 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 SUCNR1Q9BXA5 334 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 CHIAQ9BZP6 476 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 HIPK2Q9H2X6 1198 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 AUNIPQ9H7T9 357 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 Q9N2K0 584 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 GNG12Q9UBI6 72 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 VAX2Q9UIW0 290 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 JPT1Q9UK76 154 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 PUS1Q9Y606 427 aaKnown RBP eCLIP5.02□□□□□ -1.61
SF3B1-209ENST00000479532 ABCA1O95477 2261 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 OTOGQ6ZRI0 2925 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 FLNAP21333 2647 aaKnown RBP5.01□□□□□ -1.61
SF3B1-209ENST00000479532 IGHV2-26A0A0B4J1V2 119 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 TRAV39A0A0B4J263 110 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 A0A0B4J2A0 478 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 CENPVL3A0A0U1RRI6 287 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 C12orf77C9JDV5 145 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 NPIPB11E5RHQ5 1161 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 C15orf65H3BRN8 121 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 NPFFO15130 113 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 SPRY2O43597 315 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 CRLF1O75462 422 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 NXPH3O95157 252 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 DIRAS3O95661 229 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 RLN1P04808 185 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 CTXN2P0C2S0 81 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 PET100P0DJ07 73 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 OMGP23515 440 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 ZBTB25P24278 435 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 CD34P28906 385 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 FHITP49789 147 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 DLX6P56179 175 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 ACTBP60709 375 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 SELENOTP62341 195 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 ACTG1P63261 375 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 KLRD1Q13241 179 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 MIDNQ504T8 468 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 AWAT1Q58HT5 328 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 KIAA2026Q5HYC2 2103 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 FAM90A2PQ658T7 463 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 CCDC144NLQ6NUI1 221 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 BTNL8Q6UX41 500 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 Q6ZS49 121 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 IL17RELQ6ZVW7 336 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 TMEM183AQ8IXX5 376 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 OR10X1Q8NGY0 326 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 OR9G1Q8NH87 305 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 RFESDQ8TAC1 157 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 ZNF418Q8TF45 676 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-209ENST00000479532 SMIM12Q96EX1 92 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 ACY3Q96HD9 319 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 PACRGQ96M98 296 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-209ENST00000479532 AQP10Q96PS8 301 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 PRR25Q96S07 402 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 HDHD3Q9BSH5 251 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-209ENST00000479532 PBDC1Q9BVG4 233 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 SNHG12Q9BXW3 62 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 NMES1Q9C002 83 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 LINC00574Q9H8X3 128 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 PLEKHA2Q9HB19 425 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 RPS10P5Q9NQ39 176 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 OR2S2Q9NQN1 319 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 SLC2A8Q9NY64 477 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 OR5AC2Q9NZP5 309 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 MTFP1Q9UDX5 166 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 SHPKQ9UHJ6 478 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 TBL2Q9Y4P3 447 aaKnown RBP5.01□□□□□ -1.61
SF3B1-209ENST00000479532 TEX15Q9BXT5 2789 aa5.01□□□□□ -1.61
SF3B1-209ENST00000479532 IGHV3OR16-10A0A075B7F0 116 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 IGHV3-43A0A0B4J1X8 118 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 A0A1W2PRD5 423 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 A0A1W2PRF3 423 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 A0A1W2PRM7 423 aa5□□□□□ -1.61
SF3B1-209ENST00000479532 ZNF705EA8MWA4 302 aaPredicted RBP5□□□□□ -1.61
SF3B1-209ENST00000479532 J3QR06 171 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms