RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 HGFACQ04756 655 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 FAM57AQ8TBR7 257 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 SFRP2Q96HF1 295 aa12.05□□□□□ -0.48
COL20A1-206ENST00000479501 IGHV3-21A0A0B4J1V1 117 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 FABP2P12104 132 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 ERVFRD-1P60508 538 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 WDR82Q6UXN9 313 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 ZDHHC16Q969W1 377 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 RNF115Q9Y4L5 304 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 KIF26AQ9ULI4 1882 aaPredicted RBP12.04□□□□□ -0.48
COL20A1-206ENST00000479501 DPRXA6NFQ7 191 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 SLC25A17O43808 307 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 ARL14EPLP0DKL9 152 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 MUC15Q8N387 334 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 PROK2Q9HC23 129 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 DNAJC4Q9NNZ3 241 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 CDC42EP3Q9UKI2 254 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 LTBP2Q14767 1821 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 UBTD1Q9HAC8 227 aa12.04□□□□□ -0.48
COL20A1-206ENST00000479501 COLCA2A8K830 154 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 LINC00869P0C866 280 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 LRRC75BQ2VPJ9 315 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 FAM216BQ8N7L0 139 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 REG4Q9BYZ8 158 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 LOC389332A0A1B0GUA5 103 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST1H2BKO60814 126 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 NAPSAO96009 420 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST1H2BJP06899 126 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST1H2BOP23527 126 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 CRYBB3P26998 211 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST1H2BBP33778 126 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 GPR6P46095 362 aaPredicted RBP12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST1H2BDP58876 126 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 SELENOTP62341 195 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST1H2BCP62807 126 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 FOXF2Q12947 444 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST2H2BEQ16778 126 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST1H2BHQ93079 126 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST1H2BNQ99877 126 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HIST1H2BMQ99879 126 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 RALYQ9UKM9 306 aaKnown RBP12.03□□□□□ -0.48
COL20A1-206ENST00000479501 ZNF324BQ6AW86 544 aaPredicted RBP12.03□□□□□ -0.48
COL20A1-206ENST00000479501 HCP5Q6MZN7 132 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 OR4C13Q8NGP0 309 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 OR9G1Q8NH87 305 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 FAM90A1Q86YD7 464 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 FAM222BQ8WU58 562 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 RAB37Q96AX2 223 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 ZNF581Q9P0T4 197 aa12.03□□□□□ -0.48
COL20A1-206ENST00000479501 OR4D5Q8NGN0 318 aa12.02□□□□□ -0.49
COL20A1-206ENST00000479501 C2orf16Q68DN1 1984 aa12.02□□□□□ -0.49
COL20A1-206ENST00000479501 ZFHX2Q9C0A1 2572 aaPredicted RBP12.02□□□□□ -0.49
COL20A1-206ENST00000479501 KIR2DL2P43627 348 aaPredicted RBP12.02□□□□□ -0.49
COL20A1-206ENST00000479501 SRSF7Q16629 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL20A1-206ENST00000479501 CCDC144NLQ6NUI1 221 aa12.02□□□□□ -0.49
COL20A1-206ENST00000479501 ZCCHC14Q8WYQ9 949 aaKnown RBP12.02□□□□□ -0.49
COL20A1-206ENST00000479501 TMEM186Q96B77 213 aa12.02□□□□□ -0.49
COL20A1-206ENST00000479501 MRPL37Q9BZE1 423 aaKnown RBP12.02□□□□□ -0.49
COL20A1-206ENST00000479501 SDF2L1Q9HCN8 221 aa12.02□□□□□ -0.49
COL20A1-206ENST00000479501 CLEC5AQ9NY25 188 aa12.02□□□□□ -0.49
COL20A1-206ENST00000479501 KBTBD11-OT1A0A1B0GTJ5 212 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 OR4C46A6NHA9 309 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 DLL1O00548 723 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 RPL30P62888 115 aaKnown RBP12.01□□□□□ -0.49
COL20A1-206ENST00000479501 ZNF525Q8N782 197 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 COA4Q9NYJ1 87 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 IGHV1-69-2A0A0G2JMI3 117 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 HYPMO75409 117 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 MAS1LP35410 378 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 C14orf144Q96I85 54 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 C1orf147Q96MC9 270 aaPredicted RBP12.01□□□□□ -0.49
COL20A1-206ENST00000479501 HILPDAQ9Y5L2 63 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 IGHV1-18A0A0C4DH31 117 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 HLA-DRB1P01911 266 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 TFF1P04155 84 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 AMY1AP04745 511 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 LGALS7P47929 136 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 ZNF146Q15072 292 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 PRNTQ86SH4 94 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 GBGT1Q8N5D6 347 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 ST6GALNAC3Q8NDV1 305 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 MYOZ3Q8TDC0 251 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 SNRNP40Q96DI7 357 aaKnown RBP12.01□□□□□ -0.49
COL20A1-206ENST00000479501 WNT10AQ9GZT5 417 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 AUP1Q9Y679 476 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 OBSL1O75147 1896 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 TRBV9A0A0B4J1U6 114 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 SFTPCP11686 197 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 CLDND2Q8NHS1 167 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 CYTL1Q9NRR1 136 aa12.01□□□□□ -0.49
COL20A1-206ENST00000479501 PLAUP00749 431 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 RND2P52198 227 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 TMEM106BQ9NUM4 274 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 B9A039 149 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 NUBP1P53384 320 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 SRSF4Q08170 494 aaKnown RBP12□□□□□ -0.49
COL20A1-206ENST00000479501 KHDC1LQ5JSQ8 128 aa12□□□□□ -0.49
COL20A1-206ENST00000479501 NPCDR1Q9BY65 106 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms