RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 AKR1C3P42330 323 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 RAB7AP51149 207 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 CLDN12P56749 244 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 HIST1H2BDP58876 126 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 HIST1H2BCP62807 126 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 EGFEM1PQ0D2K5 195 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 GUK1Q16774 197 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 HIST2H2BEQ16778 126 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 LTC4SQ16873 150 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 ZNF674Q2M3X9 581 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 HLA-DRB5Q30154 266 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 AARDQ4LEZ3 155 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 DEFB121Q5J5C9 76 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 KHDC1LQ5JSQ8 128 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.3□□□□□ -1.56
VCP-205ENST00000479300 AKR1C8PQ5T2L2 129 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 TPTE2P1Q5T6R2 138 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 ZNF529Q6P280 563 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 Q6P435 159 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 TCF23Q7RTU1 214 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 LINC00596Q86U02 117 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 OR5AU1Q8NGC0 362 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 OR10A7Q8NGE5 316 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 OR51A2Q8NGJ7 313 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 OR4P4Q8NGL7 312 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 OR10X1Q8NGY0 326 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 OR4K15Q8NH41 348 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 RGP1Q92546 391 aaPredicted RBP5.3□□□□□ -1.56
VCP-205ENST00000479300 HIST1H2BHQ93079 126 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 TMEM106AQ96A25 262 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 BSCL2Q96G97 398 aaPredicted RBP5.3□□□□□ -1.56
VCP-205ENST00000479300 SEC22AQ96IW7 307 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 PACRGQ96M98 296 aaPredicted RBP5.3□□□□□ -1.56
VCP-205ENST00000479300 HIST1H2BNQ99877 126 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 HIST1H2BMQ99879 126 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 RNF126Q9BV68 326 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 SCRT1Q9BWW7 348 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 SLC25A31Q9H0C2 315 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 TAF9BQ9HBM6 251 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 ZNF286AQ9HBT8 521 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 FAM212BQ9NTI7 297 aaPredicted RBP5.3□□□□□ -1.56
VCP-205ENST00000479300 CALYQ9NYX4 217 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 ST3GAL6Q9Y274 331 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 VSIG4Q9Y279 399 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 FBXO7Q9Y3I1 522 aa5.3□□□□□ -1.56
VCP-205ENST00000479300 C5orf51A6NDU8 294 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 FAM90A22PA8MWA6 464 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 J3QR06 171 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 SLC17A2O00624 439 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 MMP23AO75900 390 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 GSTP1P09211 210 aaKnown RBP5.29□□□□□ -1.56
VCP-205ENST00000479300 OR8U9P0C7N5 309 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 TMEM11P17152 192 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 SERPINA2P20848 420 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 CD24P25063 80 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 G0S2P27469 103 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 GNG10P50151 68 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 BLCAPP62952 87 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 SLC35B1P78383 322 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 CD69Q07108 199 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 PPP1R1AQ13522 171 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 RAB11BQ15907 218 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 MPV17LQ2QL34 196 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 PIGYQ3MUY2 71 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 ABCA11PQ4W5N1 156 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 GGNBP1Q5YKI7 109 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 JAGN1Q8N5M9 183 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 SUMF2Q8NBJ7 301 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 OR51T1Q8NGJ9 327 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 OR8U1Q8NH10 309 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 MRGPRDQ8TDS7 321 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 DTD1Q8TEA8 209 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 PTX4Q96A99 478 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 COQ2Q96H96 371 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 CST11Q9H112 138 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 ARV1Q9H2C2 271 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 MOB4Q9Y3A3 225 aa5.29□□□□□ -1.56
VCP-205ENST00000479300 TSSC4Q9Y5U2 329 aaPredicted RBP5.29□□□□□ -1.56
VCP-205ENST00000479300 HUWE1Q7Z6Z7 4374 aaKnown RBP5.29□□□□□ -1.56
VCP-205ENST00000479300 LYSTQ99698 3801 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 B4DEV8 164 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 H0YIZ8 118 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 SDCBPO00560 298 aaPredicted RBP5.28□□□□□ -1.56
VCP-205ENST00000479300 SPINT2O43291 252 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 IGLV1-47P01700 117 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 SNRPCP09234 159 aaKnown RBP5.28□□□□□ -1.56
VCP-205ENST00000479300 SEC11BP0C7V7 166 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 CD37P11049 281 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 FABP4P15090 132 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 RBM11P57052 281 aaKnown RBP5.28□□□□□ -1.56
VCP-205ENST00000479300 PLA2G7Q13093 441 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 ELOBQ15370 118 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 C17orf58Q2M2W7 97 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 TMEM30BQ3MIR4 351 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 SCGB2B2Q4G0G5 96 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 SLC22A6Q4U2R8 563 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 COA6Q5JTJ3 125 aaKnown RBP5.28□□□□□ -1.56
VCP-205ENST00000479300 TRAT1Q6PIZ9 186 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 C10orf99Q6UWK7 81 aa5.28□□□□□ -1.56
VCP-205ENST00000479300 RNF144BQ7Z419 303 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms