RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 G3V4G9 280 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 TRAPPC2P0DI81 140 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 TRAPPC2BP0DI82 140 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 PI3P19957 117 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 INSL3P51460 131 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 DHODHQ02127 395 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 DEFB136Q30KP8 78 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 H2BFWTQ7Z2G1 175 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 REC114Q7Z4M0 266 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 FAM219AQ8IW50 185 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 GLYATL2Q8WU03 294 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 TMEM222Q9H0R3 208 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 NAA60Q9H7X0 242 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 PALMDQ9NP74 551 aa11.95□□□□□ -0.5
C9orf3-217ENST00000479161 TEX13DA0A0J9YY54 714 aaPredicted RBP11.94□□□□□ -0.5
C9orf3-217ENST00000479161 NAP1L6A6NFF2 107 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 HMX3A6NHT5 357 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 INS-IGF2F8WCM5 200 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 CYB5BO43169 146 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 IGLL1P15814 213 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 ZP3P21754 424 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 RHOGP84095 191 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 EGFEM1PQ0D2K5 195 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 OXLD1Q5BKU9 147 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 OR1L6Q8NGR2 347 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 CASTOR1Q8WTX7 329 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 IL22RA2Q969J5 263 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 TMEM56Q96MV1 263 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 FANCD2OSQ96PS1 177 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 MCUBQ9NWR8 336 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 CACFD1Q9UGQ2 172 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 KCNIP3Q9Y2W7 256 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 DNAH3Q8TD57 4116 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 SORL1Q92673 2214 aa11.94□□□□□ -0.5
C9orf3-217ENST00000479161 AARDQ4LEZ3 155 aa11.93□□□□□ -0.5
C9orf3-217ENST00000479161 SGPP2Q8IWX5 399 aa11.93□□□□□ -0.5
C9orf3-217ENST00000479161 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
C9orf3-217ENST00000479161 ATP6V0BQ99437 205 aa11.93□□□□□ -0.5
C9orf3-217ENST00000479161 C7orf50Q9BRJ6 194 aaKnown RBP11.93□□□□□ -0.5
C9orf3-217ENST00000479161 AKIP1Q9NQ31 210 aa11.93□□□□□ -0.5
C9orf3-217ENST00000479161 THYN1Q9P016 225 aa11.93□□□□□ -0.5
C9orf3-217ENST00000479161 PEF1Q9UBV8 284 aaKnown RBP11.93□□□□□ -0.5
C9orf3-217ENST00000479161 OR51B2Q9Y5P1 312 aa11.93□□□□□ -0.5
C9orf3-217ENST00000479161 TMEM56-RWDD3S4R434 201 aa11.93□□□□□ -0.5
C9orf3-217ENST00000479161 IGLV11-55A0A075B6I3 123 aa11.92□□□□□ -0.5
C9orf3-217ENST00000479161 APELAP0DMC3 54 aa11.92□□□□□ -0.5
C9orf3-217ENST00000479161 AREGP15514 252 aa11.92□□□□□ -0.5
C9orf3-217ENST00000479161 HSPE1P61604 102 aaKnown RBP11.92□□□□□ -0.5
C9orf3-217ENST00000479161 DEFA6Q01524 100 aa11.92□□□□□ -0.5
C9orf3-217ENST00000479161 ATP5G2Q06055 141 aa11.92□□□□□ -0.5
C9orf3-217ENST00000479161 C9orf66Q5T8R8 295 aa11.92□□□□□ -0.5
C9orf3-217ENST00000479161 OR4A16Q8NH70 328 aa11.92□□□□□ -0.5
C9orf3-217ENST00000479161 RBPMSQ93062 196 aaKnown RBP11.92□□□□□ -0.5
C9orf3-217ENST00000479161 PPP1R14BQ96C90 147 aa11.92□□□□□ -0.5
C9orf3-217ENST00000479161 DUX3Q96PT4 197 aa11.92□□□□□ -0.5
C9orf3-217ENST00000479161 SDHCQ99643 169 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-217ENST00000479161 IGHV4OR15-8A0A075B7B6 117 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 A0A087WW49 117 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.91□□□□□ -0.5
C9orf3-217ENST00000479161 RBMXL2O75526 392 aaKnown RBP11.91□□□□□ -0.5
C9orf3-217ENST00000479161 IGKV1-5P01602 117 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 IGHV3-11P01762 117 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 OR5AC1P0C628 307 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 SRPXP78539 464 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 BAK1Q16611 211 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 TRIM16LQ309B1 348 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 C15orf32Q32M92 178 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 TMEM128Q5BJH2 165 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 TRIQKQ629K1 86 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 TMEM230Q96A57 120 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 RRNAD1Q96FB5 475 aaKnown RBP11.91□□□□□ -0.5
C9orf3-217ENST00000479161 CXorf58Q96LI9 332 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 OR5B12Q96R08 314 aa11.91□□□□□ -0.5
C9orf3-217ENST00000479161 TGP01266 2768 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 A0A0B4J293 547 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 OVOL1O14753 267 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 DEFA4P12838 97 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 MYOD1P15172 320 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 AKR1C2P52895 323 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 UBE2MP61081 183 aaKnown RBP11.9□□□□□ -0.5
C9orf3-217ENST00000479161 PRCDQ00LT1 54 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 KLF5Q13887 457 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-217ENST00000479161 RBMS2Q15434 407 aaKnown RBP11.9□□□□□ -0.5
C9orf3-217ENST00000479161 SP6Q3SY56 376 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 PDLIM3Q53GG5 364 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-217ENST00000479161 ZNF114Q8NC26 417 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 VN1R17PQ8TDU5 208 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 DCUN1D4Q92564 292 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 ALX4Q9H161 411 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-217ENST00000479161 FBXL7Q9UJT9 491 aa11.9□□□□□ -0.5
C9orf3-217ENST00000479161 TRBV7-1A0A0A6YYK4 115 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 DBX1A6NMT0 343 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 CENPXA8MT69 81 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 OR2J3O76001 311 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 OR13C7P0DN81 318 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 ANXA3P12429 323 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 HOXD3P31249 432 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-217ENST00000479161 INPP1P49441 399 aa11.89□□□□□ -0.51
C9orf3-217ENST00000479161 SUPT4H1P63272 117 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms