RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 OR4K15Q8NH41 348 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 OR51H1Q8NH63 302 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 FGF13Q92913 245 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 C12orf43Q96C57 262 aaKnown RBP1.07□□□□□ -2.24
TARDBP-208ENST00000477447 ZHX1-C8orf76Q96EF9 292 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 ACY3Q96HD9 319 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 PPP1R2P1Q96PQ5 205 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 TSC22D3Q99576 134 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 C12orf57Q99622 126 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 SIGMAR1Q99720 223 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 AIF1LQ9BQI0 150 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 GINS3Q9BRX5 216 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 NMNAT1Q9HAN9 279 aaPredicted RBP1.07□□□□□ -2.24
TARDBP-208ENST00000477447 TMEM138Q9NPI0 162 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 BIN3Q9NQY0 253 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 COA4Q9NYJ1 87 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 SS18L2Q9UHA2 77 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 PRELID3BQ9Y3B1 194 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 AMMECR1Q9Y4X0 333 aaPredicted RBP1.07□□□□□ -2.24
TARDBP-208ENST00000477447 SYNMO15061 1565 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 BICRAQ9NZM4 1560 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 CLUHO75153 1309 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 GBF1Q92538 1859 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 ADAMTS7Q9UKP4 1686 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 PIK3C2GO75747 1445 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 PLXNA3P51805 1871 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 A0A087WX48 190 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 A0A1W2PRE2 83 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 DAPL1A0PJW8 107 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 PQLC2LA1A4F0 135 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 ARRDC5A6NEK1 342 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 J3QQQ9 107 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 FAAHO00519 579 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 BHLHE40O14503 412 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 DLEU1O43261 78 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 GNRH2O43555 120 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 PDE6DO43924 150 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 MFSD11O43934 449 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 SULT1C4O75897 302 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 OR7C1O76099 320 aaPredicted RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 MT-CO2P00403 227 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 IGF2P01344 180 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 IGLV3-27P01718 113 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 C1QCP02747 245 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 REG1AP05451 166 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 SERPINA7P05543 415 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 OR10J4P0C629 311 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 FAM228BP0C875 321 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 SMIM6P0DI80 62 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 CXCL2P19875 107 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 OGNP20774 298 aaKnown RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 CRHBPP24387 322 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 MIPP30301 263 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 CA5AP35218 305 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 OPRM1P35372 400 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 AKR1C3P42330 323 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 SERPINB10P48595 397 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 DNAJB13P59910 316 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 RPL26P61254 145 aaKnown RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 HSPE1P61604 102 aaKnown RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 RHOBP62745 196 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 RELAQ04206 551 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 EMX1Q04741 257 aaPredicted RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 SMAGPQ0VAQ4 97 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 CDK10Q15131 360 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 RSU1Q15404 277 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 GRK1Q15835 563 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 WHAMMP3Q1A5X7 153 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 PLPPR5Q32ZL2 321 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 ARHGAP11BQ3KRB8 267 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 TMEM128Q5BJH2 165 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 MESTQ5EB52 335 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 C9orf64Q5T6V5 341 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 FAM78BQ5VT40 261 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 TEX36Q5VZQ5 186 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 OR10K2Q6IF99 312 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 TNFAIP8L2Q6P589 184 aaPredicted RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 TOMM20LQ6UXN7 152 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 Q6ZSA8 131 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 RASSF6Q6ZTQ3 369 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 C2orf91Q6ZV80 131 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 LRRC28Q86X40 367 aaPredicted RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 ANGPTL5Q86XS5 388 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 UMODL1-AS1Q8N2C9 162 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 UBL4BQ8N7F7 174 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 OR52L1Q8NGH7 329 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 FNDC9Q8TBE3 224 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 BTF3L4Q96K17 158 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 PFDN5Q99471 154 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 CMSS1Q9BQ75 279 aaKnown RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 GGACTQ9BVM4 153 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 ZNF471Q9BX82 626 aaPredicted RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 MROQ9BYG7 248 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 MRPL27Q9P0M9 148 aaKnown RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 RPL26L1Q9UNX3 145 aaKnown RBP1.06□□□□□ -2.24
TARDBP-208ENST00000477447 POLR1DQ9Y2S0 133 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 HSPB11Q9Y547 144 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 RTL9Q8NET4 1388 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 COL4A2P08572 1712 aa1.06□□□□□ -2.24
TARDBP-208ENST00000477447 RTEL1-TNFRSF6BF6WH68 1400 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms