RNA–Protein interactions for RNA: ENST00000477276.2

PTPN23-204, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 5

Gene PTPN23, Length 882 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-204	ENST00000477276	TRBV12-3	P01733	135 aa		13.58	□□□□□ -0.24
PTPN23-204	ENST00000477276	FAU	P35544	74 aa	Known RBP	13.58	□□□□□ -0.24
PTPN23-204	ENST00000477276	SUPT4H1	P63272	117 aa	Known RBP	13.58	□□□□□ -0.24
PTPN23-204	ENST00000477276	RHOG	P84095	191 aa		13.58	□□□□□ -0.24
PTPN23-204	ENST00000477276	WT1-AS	Q06250	92 aa		13.58	□□□□□ -0.24
PTPN23-204	ENST00000477276	OR51B2	Q9Y5P1	312 aa		13.58	□□□□□ -0.24
PTPN23-204	ENST00000477276	B3GALNT1	O75752	331 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	CDS2	O95674	445 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	IL7	P13232	177 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	BTC	P35070	178 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	SLURP1	P55000	103 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	RAB25	P57735	213 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	ZNF57	Q68EA5	555 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	ZNF343	Q6P1L6	599 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	H2BFWT	Q7Z2G1	175 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	SLC25A42	Q86VD7	318 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	OR1L8	Q8NGR8	309 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	GALNT14	Q96FL9	552 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	TSC22D3	Q99576	134 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	SRSF8	Q9BRL6	282 aa	Known RBP	13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	PRR13	Q9NZ81	148 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	PRND	Q9UKY0	176 aa		13.57	□□□□□ -0.24
PTPN23-204	ENST00000477276	IGLV11-55	A0A075B6I3	123 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276		A0A0B4J293	547 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276		A0A0G2JLM5	398 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	C13orf42	A0A1B0GVH6	325 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	FAM223B	A6NKX1	122 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	LINC01619	G3V211	115 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	OR2J3	O76001	311 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	OR8U8	P0C7N1	319 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	TRAPPC2	P0DI81	140 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	TRAPPC2B	P0DI82	140 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	DEFA6	Q01524	100 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	TMEM187	Q14656	261 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	TRIM16L	Q309B1	348 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	TRIQK	Q629K1	86 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	THOC7	Q6I9Y2	204 aa	Known RBP	13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	FAM223A	Q8IWN6	122 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	OR5B3	Q8NH48	314 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	USMG5	Q96IX5	58 aa		13.56	□□□□□ -0.24
PTPN23-204	ENST00000477276	WIPF1	O43516	503 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	SNAPC5	O75971	98 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	HSPB1	P04792	205 aa	Known RBP	13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	CCR6	P51684	374 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	MFAP2	P55001	183 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	EXOSC2	Q13868	293 aa	Known RBP	13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276		Q6ZRM9	215 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	LINC00299	Q6ZSB3	139 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	SELENOH	Q8IZQ5	122 aa	Known RBP	13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	NECAP1	Q8NC96	275 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	DCUN1D4	Q92564	292 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	DLX4	Q92988	240 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	LSM10	Q969L4	123 aa	Known RBP	13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	TMEM56	Q96MV1	263 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	PTTG2	Q9NZH5	202 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	TMEM56-RWDD3	S4R434	201 aa		13.55	□□□□□ -0.24
PTPN23-204	ENST00000477276	ANKRD34B	A5PLL1	514 aa		13.54	□□□□□ -0.24
PTPN23-204	ENST00000477276	NDUFB8	O95169	186 aa		13.54	□□□□□ -0.24
PTPN23-204	ENST00000477276	AKR1C2	P52895	323 aa		13.54	□□□□□ -0.24
PTPN23-204	ENST00000477276	C15orf32	Q32M92	178 aa		13.54	□□□□□ -0.24
PTPN23-204	ENST00000477276	ZNF429	Q86V71	674 aa		13.54	□□□□□ -0.24
PTPN23-204	ENST00000477276	RBPMS	Q93062	196 aa	Known RBP	13.54	□□□□□ -0.24
PTPN23-204	ENST00000477276	SCGB3A2	Q96PL1	93 aa		13.54	□□□□□ -0.24
PTPN23-204	ENST00000477276	DUS4L	O95620	317 aa	Known RBP	13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	OR13C7	P0DN81	318 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	AKR1C4	P17516	323 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	HOXD3	P31249	432 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	KRTAP10-11	P60412	298 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	PRCD	Q00LT1	54 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	DHODH	Q02127	395 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	EGFEM1P	Q0D2K5	195 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	AARD	Q4LEZ3	155 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	TMEM268	Q5VZI3	342 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	SGPP2	Q8IWX5	399 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	OR4A16	Q8NH70	328 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	CCDC140	Q96MF4	163 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	HINT2	Q9BX68	163 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	FKBP11	Q9NYL4	201 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	FBXL7	Q9UJT9	491 aa		13.53	□□□□□ -0.24
PTPN23-204	ENST00000477276	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	LINC00854	A0A1B0GVQ3	168 aa		13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	MFSD2B	A6NFX1	497 aa		13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	PLA2G10	O15496	165 aa		13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	ST8SIA3	O43173	380 aa		13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	PRB2	P02812	416 aa	Predicted RBP	13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	ATP5G2	Q06055	141 aa		13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	TMED4	Q7Z7H5	227 aa		13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	DPF1	Q92782	380 aa		13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	BATF3	Q9NR55	127 aa		13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	PEF1	Q9UBV8	284 aa	Known RBP	13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	F11R	Q9Y624	299 aa	Known RBP	13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276		S4R3C0	116 aa		13.52	□□□□□ -0.25
PTPN23-204	ENST00000477276	NAP1L6	A6NFF2	107 aa		13.51	□□□□□ -0.25
PTPN23-204	ENST00000477276	BMPR1B	O00238	502 aa		13.51	□□□□□ -0.25
PTPN23-204	ENST00000477276	NDUFB6	O95139	128 aa		13.51	□□□□□ -0.25
PTPN23-204	ENST00000477276	HSPE1	P61604	102 aa	Known RBP	13.51	□□□□□ -0.25
PTPN23-204	ENST00000477276	RBMS2	Q15434	407 aa	Known RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms