RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, human

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB1-204	ENST00000476862	CCDC140	Q96MF4	163 aa		13.65	□□□□□ -0.22
ABCB1-204	ENST00000476862	TMEM56	Q96MV1	263 aa		13.65	□□□□□ -0.22
ABCB1-204	ENST00000476862	CITED4	Q96RK1	184 aa		13.65	□□□□□ -0.22
ABCB1-204	ENST00000476862	OR51B2	Q9Y5P1	312 aa		13.65	□□□□□ -0.22
ABCB1-204	ENST00000476862	TEX50	A0A1B0GTY4	177 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	IGLC7	A0M8Q6	106 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	CGB1	A6NKQ9	187 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	HPGDS	O60760	199 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	GPR183	P32249	361 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	G6PC	P35575	357 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	HAGH	Q16775	308 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	ANKRD55	Q3KP44	614 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	LYSMD2	Q8IV50	215 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	GDPD1	Q8N9F7	314 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	OR10W1	Q8NGF6	305 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	OR1L6	Q8NGR2	347 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	LSM10	Q969L4	123 aa	Known RBP	13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	FXYD6	Q9H0Q3	95 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	PLEKHA3	Q9HB20	300 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	ZC4H2	Q9NQZ6	224 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	PRND	Q9UKY0	176 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	UFC1	Q9Y3C8	167 aa		13.64	□□□□□ -0.23
ABCB1-204	ENST00000476862	MFSD2B	A6NFX1	497 aa		13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	SERPINE2	P07093	398 aa		13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	PTBP1	P26599	531 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	KLK9	Q2XQG4	91 aa		13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	SLC38A6	Q8IZM9	456 aa		13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	UXS1	Q8NBZ7	420 aa		13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	VN1R17P	Q8TDU5	208 aa		13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	MARC2	Q969Z3	335 aa		13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	KLK9	Q9UKQ9	250 aa		13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	DMRT1	Q9Y5R6	373 aa		13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	CEPT1	Q9Y6K0	416 aa		13.63	□□□□□ -0.23
ABCB1-204	ENST00000476862	ZNF785	A8K8V0	405 aa		13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	OR11H12	B2RN74	326 aa		13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	ELK1	P19419	428 aa		13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	ADAMTSL5	Q6ZMM2	481 aa		13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	H2BFWT	Q7Z2G1	175 aa		13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	CADM3	Q8N126	398 aa		13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	OR4A16	Q8NH70	328 aa		13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	C15orf40	Q8WUR7	153 aa		13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	THAP7	Q9BT49	309 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	NSG2	Q9Y328	171 aa		13.62	□□□□□ -0.23
ABCB1-204	ENST00000476862	CD7	P09564	240 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	PGAM2	P15259	253 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	ZNF182	P17025	639 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	ZNF585B	Q52M93	769 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	CASC10	Q5T4H9	136 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	TBC1D26	Q86UD7	250 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	OR52B4	Q8NGK2	314 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	OR5B3	Q8NH48	314 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	ZNF502	Q8TBZ5	544 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	CACNG8	Q8WXS5	425 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	WDR89	Q96FK6	387 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	SRD5A3	Q9H8P0	318 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	NDUFA4L2	Q9NRX3	87 aa		13.61	□□□□□ -0.23
ABCB1-204	ENST00000476862	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862		A8MWP6	167 aa		13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	ELL	P55199	621 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	UCP3	P55916	312 aa		13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	RNASE12	Q5GAN4	147 aa	Known RBP	13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	RNASE10	Q5GAN6	216 aa	Known RBP	13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	DEFB125	Q8N687	156 aa		13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	UBAC2	Q8NBM4	344 aa		13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	BSCL2	Q96G97	398 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	GAR1	Q9NY12	217 aa	Known RBP	13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	MRPL27	Q9P0M9	148 aa	Known RBP	13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	F11R	Q9Y624	299 aa	Known RBP	13.6	□□□□□ -0.23
ABCB1-204	ENST00000476862	IGHV3-35	A0A0C4DH35	117 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	TMEM213	A2RRL7	107 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	OR2T8	A6NH00	312 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	TGOLN2	O43493	480 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	ATG12	O94817	140 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	SCAF4	O95104	1147 aa	Known RBP	13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	WT1-AS	Q06250	92 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	TM4SF20	Q53R12	229 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862		Q56UQ5	140 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	GPR107	Q5VW38	600 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	SPSB3	Q6PJ21	355 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	C21orf62	Q9NYP8	219 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	EXTL2	Q9UBQ6	330 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	STAB2	Q8WWQ8	2551 aa		13.59	□□□□□ -0.23
ABCB1-204	ENST00000476862	TRAV25	A0A0B4J276	109 aa		13.58	□□□□□ -0.24
ABCB1-204	ENST00000476862		M0QYG6	137 aa		13.58	□□□□□ -0.24
ABCB1-204	ENST00000476862	EDN2	P20800	178 aa		13.58	□□□□□ -0.24
ABCB1-204	ENST00000476862	LAMTOR1	Q6IAA8	161 aa		13.58	□□□□□ -0.24
ABCB1-204	ENST00000476862	BTNL8	Q6UX41	500 aa		13.58	□□□□□ -0.24
ABCB1-204	ENST00000476862	TMEM61	Q8N0U2	210 aa		13.58	□□□□□ -0.24
ABCB1-204	ENST00000476862	ATP6V0B	Q99437	205 aa		13.58	□□□□□ -0.24
ABCB1-204	ENST00000476862	MLX	Q9UH92	298 aa		13.58	□□□□□ -0.24
ABCB1-204	ENST00000476862	SELENOK	Q9Y6D0	94 aa		13.58	□□□□□ -0.24
ABCB1-204	ENST00000476862	IGHV3-21	A0A0B4J1V1	117 aa		13.57	□□□□□ -0.24
ABCB1-204	ENST00000476862	C15orf61	A6NNL5	157 aa		13.57	□□□□□ -0.24
ABCB1-204	ENST00000476862	RGS5	O15539	181 aa		13.57	□□□□□ -0.24
ABCB1-204	ENST00000476862	ERH	P84090	104 aa	Known RBP	13.57	□□□□□ -0.24
ABCB1-204	ENST00000476862	ZFAND6	Q6FIF0	208 aa		13.57	□□□□□ -0.24
ABCB1-204	ENST00000476862	GPR141	Q7Z602	305 aa		13.57	□□□□□ -0.24
ABCB1-204	ENST00000476862	ZNF486	Q96H40	463 aa	Predicted RBP	13.57	□□□□□ -0.24

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