RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ZNF345Q14585 488 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 TMEM95Q3KNT9 176 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 VMA21Q3ZAQ7 101 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 ACOT7LQ6ZUV0 252 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 GRPEL2Q8TAA5 225 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 RAB40CQ96S21 281 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 TSNAXQ99598 290 aaKnown RBP12.37□□□□□ -0.43
CPSF3-203ENST00000475482 SLC25A33Q9BSK2 321 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 TMEM140Q9NV12 185 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 FKBP11Q9NYL4 201 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 TNFSF18Q9UNG2 199 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 HSPB11Q9Y547 144 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 IGKV1-16P04430 117 aa12.36□□□□□ -0.43
CPSF3-203ENST00000475482 VDAC2P45880 294 aaPredicted RBP12.36□□□□□ -0.43
CPSF3-203ENST00000475482 OR4A47Q6IF82 309 aa12.36□□□□□ -0.43
CPSF3-203ENST00000475482 SSX9Q7RTT3 188 aa12.36□□□□□ -0.43
CPSF3-203ENST00000475482 NDUFA11Q86Y39 141 aa12.36□□□□□ -0.43
CPSF3-203ENST00000475482 C9orf62Q8N4C0 152 aa12.36□□□□□ -0.43
CPSF3-203ENST00000475482 OR52E5Q8NH55 327 aa12.36□□□□□ -0.43
CPSF3-203ENST00000475482 CIB3Q96Q77 187 aaPredicted RBP12.36□□□□□ -0.43
CPSF3-203ENST00000475482 CLCC1Q96S66 551 aa12.36□□□□□ -0.43
CPSF3-203ENST00000475482 RNF126Q9BV68 326 aa12.36□□□□□ -0.43
CPSF3-203ENST00000475482 BET1LQ9NYM9 111 aa12.36□□□□□ -0.43
CPSF3-203ENST00000475482 PRNDQ9UKY0 176 aa12.36□□□□□ -0.43
CPSF3-203ENST00000475482 M0QZK8 103 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 SYNGR2O43760 224 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 FGF2P09038 288 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 FAM106CPP0CH98 169 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 P2RY1P47900 373 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 RPL23AP62750 156 aaKnown RBP12.35□□□□□ -0.43
CPSF3-203ENST00000475482 EBI3Q14213 229 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 CXorf66Q5JRM2 361 aaPredicted RBP12.35□□□□□ -0.43
CPSF3-203ENST00000475482 Q6ZRM9 215 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 ZNF429Q86V71 674 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 CITED2Q99967 270 aaPredicted RBP12.35□□□□□ -0.43
CPSF3-203ENST00000475482 ZC4H2Q9NQZ6 224 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 OR5AC2Q9NZP5 309 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 HSPB7Q9UBY9 170 aa12.35□□□□□ -0.43
CPSF3-203ENST00000475482 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
CPSF3-203ENST00000475482 H0YIZ8 118 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 SSSCA1O60232 199 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 SPDEFO95238 335 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 S100A11P31949 105 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 TAS2R30P59541 319 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 SPCS3P61009 180 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 UBE2KP61086 200 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 POLR2GP62487 172 aaKnown RBP eCLIP12.34□□□□□ -0.43
CPSF3-203ENST00000475482 TNFRSF9Q07011 255 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 IZUMO4Q1ZYL8 232 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 LGALSLQ3ZCW2 172 aaPredicted RBP12.34□□□□□ -0.43
CPSF3-203ENST00000475482 AARDQ4LEZ3 155 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 TCTEX1D4Q5JR98 221 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 AQP10Q96PS8 301 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 SLC25A31Q9H0C2 315 aa12.34□□□□□ -0.43
CPSF3-203ENST00000475482 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
CPSF3-203ENST00000475482 C15orf61A6NNL5 157 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 UPK2O00526 184 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 KBTBD11O94819 623 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 SCAF4O95104 1147 aaKnown RBP12.33□□□□□ -0.44
CPSF3-203ENST00000475482 MOSP00540 346 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 IFNA17P01571 189 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 SNRNP70P08621 437 aaKnown RBP12.33□□□□□ -0.44
CPSF3-203ENST00000475482 OR9G9P0C7N8 305 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 SAA1P0DJI8 122 aaPredicted RBP12.33□□□□□ -0.44
CPSF3-203ENST00000475482 KPRPQ5T749 579 aaPredicted RBP12.33□□□□□ -0.44
CPSF3-203ENST00000475482 SAMD5Q5TGI4 173 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 VKORC1L1Q8N0U8 176 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 PUSL1Q8N0Z8 303 aaKnown RBP12.33□□□□□ -0.44
CPSF3-203ENST00000475482 KCNRGQ8N5I3 272 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 TEX45Q8NA69 505 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 OR5AU1Q8NGC0 362 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 OR2T10Q8NGZ9 312 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 MAGT1Q9H0U3 335 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 ZNF257Q9Y2Q1 563 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 MOB4Q9Y3A3 225 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 WSB1Q9Y6I7 421 aa12.33□□□□□ -0.44
CPSF3-203ENST00000475482 IGHV3-72A0A0B4J1Y9 119 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 KANTRA0A1W2PQU2 76 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 CEBPZOSA8MTT3 80 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 FGF16O43320 207 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 IL6RP08887 468 aaPredicted RBP12.32□□□□□ -0.44
CPSF3-203ENST00000475482 CXCL2P19875 107 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 RPL12P30050 165 aaKnown RBP12.32□□□□□ -0.44
CPSF3-203ENST00000475482 AP2S1P53680 142 aaPredicted RBP12.32□□□□□ -0.44
CPSF3-203ENST00000475482 RPP30P78346 268 aaKnown RBP12.32□□□□□ -0.44
CPSF3-203ENST00000475482 LAMTOR1Q6IAA8 161 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 TMUB2Q71RG4 321 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 C5orf56Q8N8D9 126 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 OR5B3Q8NH48 314 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 TMEM167AQ8TBQ9 72 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 SMIM8Q96KF7 97 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 GON7Q9BXV9 100 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 ARL6Q9H0F7 186 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 ENY2Q9NPA8 101 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 TMEM14BQ9NUH8 114 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
CPSF3-203ENST00000475482 SH2D7A6NKC9 451 aaPredicted RBP12.31□□□□□ -0.44
CPSF3-203ENST00000475482 SRRM4A7MD48 611 aaKnown RBP12.31□□□□□ -0.44
CPSF3-203ENST00000475482 TAAR5O14804 337 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 TSC22D2O75157 780 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms