RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 PNRC1Q12796 327 aaPredicted RBP17.63■□□□□ 0.41
CCM2-206ENST00000474617 RNASEH2CQ8TDP1 164 aaKnown RBP17.63■□□□□ 0.41
CCM2-206ENST00000474617 RXFP4Q8TDU9 374 aa17.63■□□□□ 0.41
CCM2-206ENST00000474617 TXNDC17Q9BRA2 123 aa17.63■□□□□ 0.41
CCM2-206ENST00000474617 NIPSNAP3BQ9BS92 247 aa17.63■□□□□ 0.41
CCM2-206ENST00000474617 SSBP3Q9BWW4 388 aaPredicted RBP17.63■□□□□ 0.41
CCM2-206ENST00000474617 B4DEV8 164 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 OR13C7P0DN81 318 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 CEACAM3P40198 252 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 REG1BP48304 166 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 TMEM144Q7Z5S9 345 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 MMD2Q8IY49 270 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 Q8N7P7 452 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 OR11H6Q8NGC7 330 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 C19orf24Q9BVV8 132 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 HINT2Q9BX68 163 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 INSIG2Q9Y5U4 225 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 LOC105371242A0A075B767 164 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 TMEM250H0YL14 139 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 IGKV1D-33P01593 117 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 IGKV1-33P01594 117 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 IGLV2-23P01705 113 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 EFNA4P52798 201 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 AWAT1Q58HT5 328 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 C15orf54Q8N8G6 183 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 NANPQ8TBE9 248 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 RAB24Q969Q5 203 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 GGTLC1Q9BX51 225 aa17.62■□□□□ 0.41
CCM2-206ENST00000474617 A0A1W2PPV4 95 aa17.61■□□□□ 0.41
CCM2-206ENST00000474617 ZFP92A6NM28 416 aa17.61■□□□□ 0.41
CCM2-206ENST00000474617 M0R036 132 aa17.61■□□□□ 0.41
CCM2-206ENST00000474617 GPR6P46095 362 aaPredicted RBP17.61■□□□□ 0.41
CCM2-206ENST00000474617 COMPP49747 757 aaPredicted RBP17.61■□□□□ 0.41
CCM2-206ENST00000474617 RPEQ96AT9 228 aa17.61■□□□□ 0.41
CCM2-206ENST00000474617 MGST2Q99735 147 aa17.61■□□□□ 0.41
CCM2-206ENST00000474617 A0A087WWC5 75 aa17.6■□□□□ 0.41
CCM2-206ENST00000474617 IGHV1-3A0A0C4DH29 117 aa17.6■□□□□ 0.41
CCM2-206ENST00000474617 C7orf77A4D0Y5 90 aa17.6■□□□□ 0.41
CCM2-206ENST00000474617 RNASE2P10153 161 aaKnown RBP17.6■□□□□ 0.41
CCM2-206ENST00000474617 ARSJQ5FYB0 599 aaPredicted RBP17.6■□□□□ 0.41
CCM2-206ENST00000474617 FAM122CQ6P4D5 195 aa17.6■□□□□ 0.41
CCM2-206ENST00000474617 OR4P4Q8NGL7 312 aa17.6■□□□□ 0.41
CCM2-206ENST00000474617 SLC35E1Q96K37 410 aa17.6■□□□□ 0.41
CCM2-206ENST00000474617 RPS10P5Q9NQ39 176 aa17.6■□□□□ 0.41
CCM2-206ENST00000474617 ONECUT1Q9UBC0 465 aa17.6■□□□□ 0.41
CCM2-206ENST00000474617 PRELID1Q9Y255 219 aa17.6■□□□□ 0.41
CCM2-206ENST00000474617 PXMP4Q9Y6I8 212 aa17.6■□□□□ 0.41
CCM2-206ENST00000474617 TET2Q6N021 2002 aaPredicted RBP17.6■□□□□ 0.41
CCM2-206ENST00000474617 LY6LH3BQJ8 138 aa17.59■□□□□ 0.41
CCM2-206ENST00000474617 PRTN3P24158 256 aa17.59■□□□□ 0.41
CCM2-206ENST00000474617 MEF2BQ02080 365 aaPredicted RBP17.59■□□□□ 0.41
CCM2-206ENST00000474617 CYB561D1Q8N8Q1 229 aa17.59■□□□□ 0.41
CCM2-206ENST00000474617 TVP23CQ96ET8 276 aa17.59■□□□□ 0.41
CCM2-206ENST00000474617 SRSF8Q9BRL6 282 aaKnown RBP17.59■□□□□ 0.41
CCM2-206ENST00000474617 SLC25A22Q9H936 323 aa17.59■□□□□ 0.41
CCM2-206ENST00000474617 HIVEP3Q5T1R4 2406 aa17.59■□□□□ 0.41
CCM2-206ENST00000474617 ABCA4P78363 2273 aa17.59■□□□□ 0.41
CCM2-206ENST00000474617 OOSP1A8MZH6 123 aa17.58■□□□□ 0.41
CCM2-206ENST00000474617 NUPL2O15504 423 aaKnown RBP17.58■□□□□ 0.41
CCM2-206ENST00000474617 MT-CO2P00403 227 aa17.58■□□□□ 0.41
CCM2-206ENST00000474617 HNF4GQ14541 408 aa17.58■□□□□ 0.41
CCM2-206ENST00000474617 TMEM88Q6PEY1 159 aa17.58■□□□□ 0.41
CCM2-206ENST00000474617 SSX7Q7RTT5 188 aa17.58■□□□□ 0.41
CCM2-206ENST00000474617 PNKDQ8N490 385 aa17.58■□□□□ 0.41
CCM2-206ENST00000474617 ZNF430Q9H8G1 570 aaPredicted RBP17.58■□□□□ 0.41
CCM2-206ENST00000474617 NBASA2RRP1 2371 aa17.58■□□□□ 0.4
CCM2-206ENST00000474617 MALRD1Q5VYJ5 2156 aa17.58■□□□□ 0.4
CCM2-206ENST00000474617 ZZEF1O43149 2961 aa17.58■□□□□ 0.4
CCM2-206ENST00000474617 NBEAQ8NFP9 2946 aa17.58■□□□□ 0.4
CCM2-206ENST00000474617 TPRP12270 2363 aaKnown RBP17.58■□□□□ 0.4
CCM2-206ENST00000474617 C22orf46C9J442 243 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 H3BQ15 152 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 ENSAO43768 121 aaKnown RBP17.57■□□□□ 0.4
CCM2-206ENST00000474617 ATF4P18848 351 aaPredicted RBP17.57■□□□□ 0.4
CCM2-206ENST00000474617 HTR1DP28221 377 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 UQCRFS1P47985 274 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 FGF8P55075 233 aaPredicted RBP17.57■□□□□ 0.4
CCM2-206ENST00000474617 RHOBP62745 196 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 CD69Q07108 199 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 ETFRF1Q6IPR1 90 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 CBLN2Q8IUK8 224 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 ZNF114Q8NC26 417 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 COL6A6A6NMZ7 2263 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 CXorf65A6NEN9 183 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 ACTL6BO94805 426 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 B2MP61769 119 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 DIAPH2-AS1Q14236 149 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 UBTD1Q9HAC8 227 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 SIRT7Q9NRC8 400 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 DPM3Q9P2X0 92 aa17.57■□□□□ 0.4
CCM2-206ENST00000474617 PKD1L2Q7Z442 2459 aa17.56■□□□□ 0.4
CCM2-206ENST00000474617 ITPR1Q14643 2758 aa17.56■□□□□ 0.4
CCM2-206ENST00000474617 SLC25A17O43808 307 aa17.56■□□□□ 0.4
CCM2-206ENST00000474617 CXorf1O96002 111 aa17.56■□□□□ 0.4
CCM2-206ENST00000474617 CRYGBP07316 175 aa17.56■□□□□ 0.4
CCM2-206ENST00000474617 SNRNP70P08621 437 aaKnown RBP17.56■□□□□ 0.4
CCM2-206ENST00000474617 PRSS8Q16651 343 aa17.56■□□□□ 0.4
CCM2-206ENST00000474617 CCDC144NLQ6NUI1 221 aa17.56■□□□□ 0.4
CCM2-206ENST00000474617 MOB3BQ86TA1 216 aa17.56■□□□□ 0.4
CCM2-206ENST00000474617 PUS1Q9Y606 427 aaKnown RBP eCLIP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms