RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, human

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-204	ENST00000474413	ANKRD20A5P	A0PJZ0	165 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	C15orf61	A6NNL5	157 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	PPP5D1	E7EU14	171 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413		H0Y980	276 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	IGKV1-5	P01602	117 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	IGHV3-23	P01764	117 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	IFNA6	P05013	189 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	ERVK-16	P61578	105 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	ATP5G2	Q06055	141 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	ZNF79	Q15937	498 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	ZNF429	Q86V71	674 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	ZNF486	Q96H40	463 aa	Predicted RBP	13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	COMMD5	Q9GZQ3	224 aa		13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	RSL24D1	Q9UHA3	163 aa	Known RBP	13.71	□□□□□ -0.21
EFNA1-204	ENST00000474413	HLA-A	P01891	365 aa	Known RBP	13.7	□□□□□ -0.22
EFNA1-204	ENST00000474413	SPN	P16150	400 aa		13.7	□□□□□ -0.22
EFNA1-204	ENST00000474413	EDN2	P20800	178 aa		13.7	□□□□□ -0.22
EFNA1-204	ENST00000474413	SCGB2B2	Q4G0G5	96 aa		13.7	□□□□□ -0.22
EFNA1-204	ENST00000474413	ADAMTSL5	Q6ZMM2	481 aa		13.7	□□□□□ -0.22
EFNA1-204	ENST00000474413	SRSF8	Q9BRL6	282 aa	Known RBP	13.7	□□□□□ -0.22
EFNA1-204	ENST00000474413	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.7	□□□□□ -0.22
EFNA1-204	ENST00000474413		A0A0G2JRQ6	117 aa		13.69	□□□□□ -0.22
EFNA1-204	ENST00000474413	DPPA5	A6NC42	116 aa		13.69	□□□□□ -0.22
EFNA1-204	ENST00000474413	ZNF701	M0R085	212 aa	Predicted RBP	13.69	□□□□□ -0.22
EFNA1-204	ENST00000474413	IGLV1-51	P01701	117 aa		13.69	□□□□□ -0.22
EFNA1-204	ENST00000474413	MEF2D	Q14814	521 aa		13.69	□□□□□ -0.22
EFNA1-204	ENST00000474413	GDPD1	Q8N9F7	314 aa		13.69	□□□□□ -0.22
EFNA1-204	ENST00000474413	OR9G4	Q8NGQ1	327 aa		13.69	□□□□□ -0.22
EFNA1-204	ENST00000474413	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.69	□□□□□ -0.22
EFNA1-204	ENST00000474413	C5orf66	Q9H5L9	145 aa		13.69	□□□□□ -0.22
EFNA1-204	ENST00000474413	OR51B2	Q9Y5P1	312 aa		13.69	□□□□□ -0.22
EFNA1-204	ENST00000474413	CCDC160	A6NGH7	325 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	CTSD	P07339	412 aa	Predicted RBP	13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	CSN3	P07498	182 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	AKAIN1	P0CW23	69 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	TRAPPC2	P0DI81	140 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	TRAPPC2B	P0DI82	140 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	SP6	Q3SY56	376 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	CCDC190	Q86UF4	302 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	OR1L8	Q8NGR8	309 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	LHFPL5	Q8TAF8	219 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	SLC2A8	Q9NY64	477 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	RABL2B	Q9UNT1	228 aa		13.68	□□□□□ -0.22
EFNA1-204	ENST00000474413	SORL1	Q92673	2214 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	C3orf85	A0A1B0GTC6	90 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	FABP12	A6NFH5	140 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	SERPINE2	P07093	398 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	OR13C7	P0DN81	318 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	UCP1	P25874	307 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	S100G	P29377	79 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	KLF9	Q13886	244 aa	Predicted RBP	13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	RPEL1	Q2QD12	228 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	THOC7	Q6I9Y2	204 aa	Known RBP	13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	OR51S1	Q8NGJ8	323 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	LSM10	Q969L4	123 aa	Known RBP	13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	TMEM230	Q96A57	120 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	ZNF414	Q96IQ9	312 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413	PRND	Q9UKY0	176 aa		13.67	□□□□□ -0.22
EFNA1-204	ENST00000474413		F8W735	103 aa	Predicted RBP	13.66	□□□□□ -0.22
EFNA1-204	ENST00000474413	DEFB121	Q5J5C9	76 aa		13.66	□□□□□ -0.22
EFNA1-204	ENST00000474413	CLEC19A	Q6UXS0	136 aa		13.66	□□□□□ -0.22
EFNA1-204	ENST00000474413	OR5B3	Q8NH48	314 aa		13.66	□□□□□ -0.22
EFNA1-204	ENST00000474413	ZNF502	Q8TBZ5	544 aa		13.66	□□□□□ -0.22
EFNA1-204	ENST00000474413	B9D2	Q9BPU9	175 aa		13.66	□□□□□ -0.22
EFNA1-204	ENST00000474413	HINT2	Q9BX68	163 aa		13.66	□□□□□ -0.22
EFNA1-204	ENST00000474413	GPR132	Q9UNW8	380 aa		13.66	□□□□□ -0.22
EFNA1-204	ENST00000474413	F11R	Q9Y624	299 aa	Known RBP	13.66	□□□□□ -0.22
EFNA1-204	ENST00000474413		A0A0B4J293	547 aa		13.65	□□□□□ -0.22
EFNA1-204	ENST00000474413	HIST1H1B	P16401	226 aa	Known RBP	13.65	□□□□□ -0.22
EFNA1-204	ENST00000474413	MECP2	P51608	486 aa	Known RBP	13.65	□□□□□ -0.22
EFNA1-204	ENST00000474413	SURF2	Q15527	256 aa	Predicted RBP	13.65	□□□□□ -0.22
EFNA1-204	ENST00000474413	C11orf87	Q6NUJ2	197 aa		13.65	□□□□□ -0.22
EFNA1-204	ENST00000474413	ZFAND1	Q8TCF1	268 aa		13.65	□□□□□ -0.22
EFNA1-204	ENST00000474413	OR4C12	Q96R67	309 aa		13.65	□□□□□ -0.22
EFNA1-204	ENST00000474413	TSC22D3	Q99576	134 aa		13.65	□□□□□ -0.22
EFNA1-204	ENST00000474413	THAP7	Q9BT49	309 aa	Predicted RBP	13.65	□□□□□ -0.22
EFNA1-204	ENST00000474413	ZMAT5	Q9UDW3	170 aa	Known RBP	13.65	□□□□□ -0.22
EFNA1-204	ENST00000474413	IZUMO1R	A6ND01	250 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	DISC1	C4P0D8	188 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413		K7EIM0	57 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	SNAPC5	O75971	98 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	OR2C1	O95371	312 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	DHFR	P00374	187 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	OR5AC1	P0C628	307 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	DEFA4	P12838	97 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	GP9	P14770	177 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	PRCD	Q00LT1	54 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	H2BFWT	Q7Z2G1	175 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	OR6Q1	Q8NGQ2	317 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	GLYATL2	Q8WU03	294 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	EEF1AKMT3	Q96AZ1	226 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	NAA60	Q9H7X0	242 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	SIGLEC8	Q9NYZ4	499 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	COPZ2	Q9P299	210 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	STAB2	Q8WWQ8	2551 aa		13.64	□□□□□ -0.23
EFNA1-204	ENST00000474413	CRYM-AS1	A6NIL9	109 aa		13.63	□□□□□ -0.23
EFNA1-204	ENST00000474413	LY86	O95711	162 aa		13.63	□□□□□ -0.23
EFNA1-204	ENST00000474413	GPR183	P32249	361 aa		13.63	□□□□□ -0.23
EFNA1-204	ENST00000474413	ARL3	P36405	182 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms