RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 VCX3BQ9H321 246 aa2.42□□□□□ -2.02
CCDC66-215ENST00000473322 CENPHQ9H3R5 247 aa2.42□□□□□ -2.02
CCDC66-215ENST00000473322 PAQR5Q9NXK6 330 aaPredicted RBP2.42□□□□□ -2.02
CCDC66-215ENST00000473322 IL36BQ9NZH7 164 aa2.42□□□□□ -2.02
CCDC66-215ENST00000473322 FUT9Q9Y231 359 aa2.42□□□□□ -2.02
CCDC66-215ENST00000473322 ITGB4P16144 1822 aa2.42□□□□□ -2.02
CCDC66-215ENST00000473322 UNC13AQ9UPW8 1703 aa2.42□□□□□ -2.02
CCDC66-215ENST00000473322 TMEM269A0A1B0GVZ9 245 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 I3L521 148 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 C1QBP02746 253 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 OR4E1P0C645 316 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 P0C880 135 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 PPIBP23284 216 aaKnown RBP2.41□□□□□ -2.02
CCDC66-215ENST00000473322 CA5AP35218 305 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 GNG10P50151 68 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 KRTAP10-10P60014 251 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 HBA1P69905 142 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 PABPC1L2AQ5JQF8 200 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 Q9BRP9 147 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 CCDC90BQ9GZT6 254 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 RNASE7Q9H1E1 156 aaKnown RBP2.41□□□□□ -2.02
CCDC66-215ENST00000473322 UQCC1Q9NVA1 299 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 C14orf105Q9NVL8 296 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 OPTCQ9UBM4 332 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 PYCARDQ9ULZ3 195 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 FAM32AQ9Y421 112 aaKnown RBP2.41□□□□□ -2.02
CCDC66-215ENST00000473322 V9GYQ6 96 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 SHANK3Q9BYB0 1731 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 DSCAMO60469 2012 aa2.41□□□□□ -2.02
CCDC66-215ENST00000473322 TRAV9-1A0A075B6T8 112 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 MUC21A0A0G2JKD1 596 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 MUC21A0A140T8X8 626 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 DPRXA6NFQ7 191 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 TXNDC9O14530 226 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 LEPROTO15243 131 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 CTSGP08311 255 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 IFI30P13284 250 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 HIST1H2BOP23527 126 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 HIST1H2BBP33778 126 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 HIST1H2BDP58876 126 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 HIST1H2BCP62807 126 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 TAF9Q16594 264 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 HIST2H2BEQ16778 126 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.4□□□□□ -2.03
CCDC66-215ENST00000473322 HCP5Q6MZN7 132 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 LYZL1Q6UWQ5 148 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 LHFPL1Q86WI0 220 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 HIST1H2BHQ93079 126 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 GPR146Q96CH1 333 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 C20orf166-AS1Q96NR2 134 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 HIST1H2BNQ99877 126 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 HIST1H2BMQ99879 126 aa2.4□□□□□ -2.03
CCDC66-215ENST00000473322 TRAV38-1A0A0B4J264 116 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 A0A0J9YX75 114 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 J3QRK9 145 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 IFNA1P01562 189 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 MSMBP08118 114 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 LGALS3P17931 250 aaKnown RBP2.39□□□□□ -2.03
CCDC66-215ENST00000473322 NFYAP23511 347 aaPredicted RBP2.39□□□□□ -2.03
CCDC66-215ENST00000473322 DR1Q01658 176 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 GOLT1AQ6ZVE7 132 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 S100A7AQ86SG5 101 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 SLC35F6Q8N357 371 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 PACRGLQ8N7B6 248 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.39□□□□□ -2.03
CCDC66-215ENST00000473322 DERL1Q9BUN8 251 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 TTTY13Q9BZ97 58 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 ENY2Q9NPA8 101 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 TVP23BQ9NYZ1 205 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 CCL26Q9Y258 94 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 MINOS1-NBL1R4GNA1 71 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 SHANK1Q9Y566 2161 aa2.39□□□□□ -2.03
CCDC66-215ENST00000473322 ATG2BQ96BY7 2078 aa2.38□□□□□ -2.03
CCDC66-215ENST00000473322 ZSWIM8A7E2V4 1837 aa2.38□□□□□ -2.03
CCDC66-215ENST00000473322 C11orf86A6NJI1 115 aa2.38□□□□□ -2.03
CCDC66-215ENST00000473322 FABP5P3A8MUU1 101 aa2.38□□□□□ -2.03
CCDC66-215ENST00000473322 CREBL2O60519 120 aaPredicted RBP2.38□□□□□ -2.03
CCDC66-215ENST00000473322 IGKV1-5P01602 117 aa2.38□□□□□ -2.03
CCDC66-215ENST00000473322 Q6Q795 121 aa2.38□□□□□ -2.03
CCDC66-215ENST00000473322 MSRB3Q8IXL7 192 aa2.38□□□□□ -2.03
CCDC66-215ENST00000473322 OR5J2Q8NH18 312 aa2.38□□□□□ -2.03
CCDC66-215ENST00000473322 H1FXQ92522 213 aaKnown RBP2.38□□□□□ -2.03
CCDC66-215ENST00000473322 TUBA4BQ9H853 241 aa2.38□□□□□ -2.03
CCDC66-215ENST00000473322 LCTP09848 1927 aa2.38□□□□□ -2.03
CCDC66-215ENST00000473322 DENND4BO75064 1496 aaPredicted RBP2.38□□□□□ -2.03
CCDC66-215ENST00000473322 ZNF638Q14966 1978 aaKnown RBP2.38□□□□□ -2.03
CCDC66-215ENST00000473322 IGHV3-64A0A075B6Q5 118 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 hCG_1818297A0A087WSY0 165 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 MDFIC2A0A1B0GVS7 189 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 TRAPPC13A5PLN9 417 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 A8MT66 165 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 E7EQL1 145 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 IGHV3-7P01780 117 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 SULT1A3P0DMM9 295 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 SULT1A4P0DMN0 295 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 TPI1P60174 286 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 TNFRSF9Q07011 255 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 SPANXN3Q5MJ09 141 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 AADACL3Q5VUY0 350 aa2.37□□□□□ -2.03
CCDC66-215ENST00000473322 Q6ZS52 159 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms