RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CACNG8Q8WXS5 425 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 QTRT1Q9BXR0 403 aaKnown RBP11.5□□□□□ -0.57
VTI1A-203ENST00000472892 THYN1Q9P016 225 aa11.5□□□□□ -0.57
VTI1A-203ENST00000472892 A0A087WXM4 84 aa11.49□□□□□ -0.57
VTI1A-203ENST00000472892 TEX50A0A1B0GTY4 177 aa11.49□□□□□ -0.57
VTI1A-203ENST00000472892 OR11H12B2RN74 326 aa11.49□□□□□ -0.57
VTI1A-203ENST00000472892 C8orf88P0DMB2 117 aa11.49□□□□□ -0.57
VTI1A-203ENST00000472892 F2RP25116 425 aa11.49□□□□□ -0.57
VTI1A-203ENST00000472892 TAS2R46P59540 309 aa11.49□□□□□ -0.57
VTI1A-203ENST00000472892 LSM3P62310 102 aaKnown RBP11.49□□□□□ -0.57
VTI1A-203ENST00000472892 ZNF57Q68EA5 555 aaPredicted RBP11.49□□□□□ -0.57
VTI1A-203ENST00000472892 THOC7Q6I9Y2 204 aaKnown RBP11.49□□□□□ -0.57
VTI1A-203ENST00000472892 HSD17B13Q7Z5P4 300 aaPredicted RBP11.49□□□□□ -0.57
VTI1A-203ENST00000472892 UXS1Q8NBZ7 420 aa11.49□□□□□ -0.57
VTI1A-203ENST00000472892 OR10W1Q8NGF6 305 aa11.49□□□□□ -0.57
VTI1A-203ENST00000472892 MLXQ9UH92 298 aa11.49□□□□□ -0.57
VTI1A-203ENST00000472892 LCE6AA0A183 80 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 MARCH11A6NNE9 402 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 RLN1P04808 185 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 SERPINE2P07093 398 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 TRAPPC2P0DI81 140 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 TRAPPC2BP0DI82 140 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 RPA2P15927 270 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 PRSS3P35030 304 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 LPAR6P43657 344 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 WT1-ASQ06250 92 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 TM4SF20Q53R12 229 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 UNQ9165/PRO28630Q6UXU0 137 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 TMEM61Q8N0U2 210 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 OR5H2Q8NGV7 314 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 OR6F1Q8NGZ6 308 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 VN1R17PQ8TDU5 208 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 FCAMRQ8WWV6 532 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 SLC25A46Q96AG3 418 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 DGCR14Q96DF8 476 aaKnown RBP11.48□□□□□ -0.57
VTI1A-203ENST00000472892 WFDC10AQ9H1F0 79 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 VCX3AQ9NNX9 186 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 NDUFA4L2Q9NRX3 87 aa11.48□□□□□ -0.57
VTI1A-203ENST00000472892 CYB5BO43169 146 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 OR13C7P0DN81 318 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 GPR183P32249 361 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 ELLP55199 621 aaPredicted RBP11.47□□□□□ -0.57
VTI1A-203ENST00000472892 ERVK-16P61578 105 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 ZNF585BQ52M93 769 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 SLC16A13Q7RTY0 426 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 CMTM1Q8IZ96 169 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 GDPD1Q8N9F7 314 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 OR1L8Q8NGR8 309 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 GPX8Q8TED1 209 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 MARC2Q969Z3 335 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 CMTM3Q96MX0 182 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 ZNF436Q9C0F3 470 aaPredicted RBP11.47□□□□□ -0.57
VTI1A-203ENST00000472892 SRD5A3Q9H8P0 318 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 RETNQ9HD89 108 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 MRPL27Q9P0M9 148 aaKnown RBP11.47□□□□□ -0.57
VTI1A-203ENST00000472892 SELENOKQ9Y6D0 94 aa11.47□□□□□ -0.57
VTI1A-203ENST00000472892 TRAV25A0A0B4J276 109 aa11.46□□□□□ -0.57
VTI1A-203ENST00000472892 GPR31O00270 319 aa11.46□□□□□ -0.57
VTI1A-203ENST00000472892 TNFAIP8O95379 198 aa11.46□□□□□ -0.57
VTI1A-203ENST00000472892 KRASP01116 189 aa11.46□□□□□ -0.57
VTI1A-203ENST00000472892 EIF4EP06730 217 aaKnown RBP11.46□□□□□ -0.57
VTI1A-203ENST00000472892 PLET1Q6UQ28 207 aa11.46□□□□□ -0.57
VTI1A-203ENST00000472892 GAR1Q9NY12 217 aaKnown RBP11.46□□□□□ -0.57
VTI1A-203ENST00000472892 LYSTQ99698 3801 aa11.46□□□□□ -0.58
VTI1A-203ENST00000472892 TGOLN2O43493 480 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 APOA1P02647 267 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 HLA-DMAP28067 261 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 HRH1P35367 487 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 G6PCP35575 357 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 MFAP2P55001 183 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 ANKRD55Q3KP44 614 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 LPCAT3Q6P1A2 487 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 OR52B4Q8NGK2 314 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 LSM10Q969L4 123 aaKnown RBP11.45□□□□□ -0.58
VTI1A-203ENST00000472892 ATP6V0BQ99437 205 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 FXYD6Q9H0Q3 95 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 SCPEP1Q9HB40 452 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 FAM212BQ9NTI7 297 aaPredicted RBP11.45□□□□□ -0.58
VTI1A-203ENST00000472892 COMMD3Q9UBI1 195 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 UFC1Q9Y3C8 167 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 OR51B2Q9Y5P1 312 aa11.45□□□□□ -0.58
VTI1A-203ENST00000472892 F11RQ9Y624 299 aaKnown RBP11.45□□□□□ -0.58
VTI1A-203ENST00000472892 IGHV3-35A0A0C4DH35 117 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 SMIM31A0A1B0GVY4 71 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 SNAPC5O75971 98 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 SCAF4O95104 1147 aaKnown RBP11.44□□□□□ -0.58
VTI1A-203ENST00000472892 NCS1P62166 190 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 BTNL8Q6UX41 500 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 IL17DQ8TAD2 202 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 FAM110AQ9BQ89 295 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 FUNDC2Q9BWH2 189 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 C5orf66Q9H5L9 145 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 FKBP11Q9NYL4 201 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 PRNDQ9UKY0 176 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 NSG2Q9Y328 171 aa11.44□□□□□ -0.58
VTI1A-203ENST00000472892 OR2T8A6NH00 312 aa11.43□□□□□ -0.58
VTI1A-203ENST00000472892 TSPAN5P62079 268 aa11.43□□□□□ -0.58
VTI1A-203ENST00000472892 SPSB3Q6PJ21 355 aa11.43□□□□□ -0.58
VTI1A-203ENST00000472892 RBPMS2Q6ZRY4 209 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 231.4 ms