RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 GUK1Q16774 197 aa1.55□□□□□ -2.16
PRPF40A-208ENST00000472760 CCDC122Q5T0U0 273 aa1.55□□□□□ -2.16
PRPF40A-208ENST00000472760 A0A0J9YY10 115 aa1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 A0A1B0GX78 115 aa1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 IRGMA1A4Y4 181 aa1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 EEF1E1-BLOC1S5C9J1V9 151 aa1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 RPSAP08865 295 aaKnown RBP1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 OR5G3P0C626 314 aa1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 EIF2B2P49770 351 aaKnown RBP1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 NKX2-5P52952 324 aaPredicted RBP1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 HIST3H3Q16695 136 aa1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 PTRHD1Q6GMV3 140 aaKnown RBP1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 C8orf74Q6P047 294 aa1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 IQCF2Q8IXL9 164 aa1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 OR2T4Q8NH00 348 aa1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 NOSIPQ9Y314 301 aaKnown RBP1.54□□□□□ -2.16
PRPF40A-208ENST00000472760 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 SMIM23A6NLE4 172 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 FABP5P3A8MUU1 101 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 M0R036 132 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 SDCBPO00560 298 aaPredicted RBP1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 NIPSNAP2O75323 286 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 PRM2P04554 102 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 ARL14EPLP0DKL9 152 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 HIST1H1EP10412 219 aaKnown RBP1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 Q1T7F1 81 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 Q6ZS49 121 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 OR8B3Q8NGG8 313 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 KLK6Q92876 244 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 SLC35B4Q969S0 331 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 WDR61Q9GZS3 305 aaKnown RBP1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 CYSTM1Q9H1C7 97 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 CISHQ9NSE2 258 aa1.53□□□□□ -2.16
PRPF40A-208ENST00000472760 TRAPPC13A5PLN9 417 aa1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 LYNX1P0DP58 116 aa1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 RPS4Y1P22090 263 aaKnown RBP1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 FXYD2P54710 66 aa1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 SPCS3P61009 180 aa1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 CCL20P78556 96 aa1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 OR2F1Q13607 317 aa1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 IBA57Q5T440 356 aaKnown RBP1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 ALKAL1Q6UXT8 129 aa1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 DCXRQ7Z4W1 244 aa1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 MCFD2Q8NI22 146 aa1.52□□□□□ -2.17
PRPF40A-208ENST00000472760 KIF24Q5T7B8 1368 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 IGKV2-40A0A087WW87 121 aaPredicted RBP1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 TGIF2-C20orf24A0A0A6YYL0 155 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 IGKV3D-7A0A0C4DH55 119 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 IGKV3OR2-268A0A0C4DH90 116 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 IBA57-AS1B1ANH7 110 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 PSMD12O00232 456 aaPredicted RBP1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 AHSA1O95433 338 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 IGKV2D-40P01614 121 aaPredicted RBP1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 METTL15P1P0C7V9 234 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 CD79AP11912 226 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 SUPT4H1P63272 117 aaKnown RBP1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 IFITM2Q01629 132 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 SYPL2Q5VXT5 272 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 DHFR2Q86XF0 187 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 C1orf158Q8N1D5 194 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 TMEM86BQ8N661 226 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 MRPL30Q8TCC3 161 aaKnown RBP1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 C10orf105Q8TEF2 133 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 IMP4Q96G21 291 aaKnown RBP1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 CMTM6Q9NX76 183 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 CRCT1Q9UGL9 99 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 BAIAP2Q9UQB8 552 aa1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 SOX21Q9Y651 276 aaPredicted RBP1.51□□□□□ -2.17
PRPF40A-208ENST00000472760 CUL9Q8IWT3 2517 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 SNAPC4Q5SXM2 1469 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 PMP2P02689 132 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 UBBP0CG47 229 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 SULT1A1P50225 295 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 AADACL3Q5VUY0 350 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 C9orf163Q8N9P6 203 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 C11orf40Q8WZ69 217 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 OR52E6Q96RD3 313 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 ADAT1Q9BUB4 502 aaKnown RBP1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 PARVGQ9HBI0 331 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 SMARCA4P51532 1647 aa1.5□□□□□ -2.17
PRPF40A-208ENST00000472760 FN1P02751 2386 aaKnown RBP1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 MRPS14O60783 128 aaKnown RBP1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 IFNA16P05015 189 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 HIST1H2BOP23527 126 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 HIST1H2BBP33778 126 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 HIST1H2BDP58876 126 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 PSME3P61289 254 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 HIST1H2BCP62807 126 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 CDK5R1Q15078 307 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 HIST2H2BEQ16778 126 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 UNQ6190/PRO20217Q6UXQ8 127 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 LRRC25Q8N386 305 aaPredicted RBP1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 HIST1H2BHQ93079 126 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 HIST1H2BNQ99877 126 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 HIST1H2BMQ99879 126 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 DERL1Q9BUN8 251 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 COMMD5Q9GZQ3 224 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 PRTFDC1Q9NRG1 225 aa1.49□□□□□ -2.17
PRPF40A-208ENST00000472760 LHFPL6Q9Y693 200 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms