RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ECI1P42126 302 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 MECP2P51608 486 aaKnown RBP9.16□□□□□ -0.94
CLRN1-205ENST00000472224 AP3S2P59780 193 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 ZNF45Q02386 682 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 EXOSC2Q13868 293 aaKnown RBP9.16□□□□□ -0.94
CLRN1-205ENST00000472224 H2BFWTQ7Z2G1 175 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 CCDC190Q86UF4 302 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 TOMM5Q8N4H5 51 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 TTC9CQ8N5M4 171 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 RNASE11Q8TAA1 199 aaKnown RBP9.16□□□□□ -0.94
CLRN1-205ENST00000472224 DCUN1D4Q92564 292 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 TRIM63Q969Q1 353 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 TP53RKQ96S44 253 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 QTRT1Q9BXR0 403 aaKnown RBP9.16□□□□□ -0.94
CLRN1-205ENST00000472224 AKIP1Q9NQ31 210 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 NDUFA13Q9P0J0 144 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 SCP2D1Q9UJQ7 156 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 ZNF257Q9Y2Q1 563 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 TENM2Q9NT68 2774 aa9.16□□□□□ -0.94
CLRN1-205ENST00000472224 SORL1Q92673 2214 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 TEX13DA0A0J9YY54 714 aaPredicted RBP9.15□□□□□ -0.94
CLRN1-205ENST00000472224 C3orf85A0A1B0GTC6 90 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 CGB1A6NKQ9 187 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 NPIPB5A8MRT5 1133 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 K7EIL1 84 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 OVOL1O14753 267 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 DHFRP00374 187 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 IGKV1-39P01597 117 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 IGKV1D-39P04432 117 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 HSPB1P04792 205 aaKnown RBP9.15□□□□□ -0.94
CLRN1-205ENST00000472224 PSMB6P28072 239 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 INPP1P49441 399 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 AKR1C2P52895 323 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 ATP5G2Q06055 141 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 ZNF79Q15937 498 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 SP6Q3SY56 376 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 ZNF57Q68EA5 555 aaPredicted RBP9.15□□□□□ -0.94
CLRN1-205ENST00000472224 OR1L8Q8NGR8 309 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 USMG5Q96IX5 58 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 FAM212BQ9NTI7 297 aaPredicted RBP9.15□□□□□ -0.94
CLRN1-205ENST00000472224 FBXL7Q9UJT9 491 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 OR51B2Q9Y5P1 312 aa9.15□□□□□ -0.94
CLRN1-205ENST00000472224 TEX50A0A1B0GTY4 177 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 IGLC7A0M8Q6 106 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 FAM223BA6NKX1 122 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 C15orf61A6NNL5 157 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 TRBV12-3P01733 135 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 IGHV3-23P01764 117 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 OR5AC1P0C628 307 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 TRAPPC2P0DI81 140 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 TRAPPC2BP0DI82 140 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 PTBP1P26599 531 aaKnown RBP eCLIP9.14□□□□□ -0.95
CLRN1-205ENST00000472224 KLF9Q13886 244 aaPredicted RBP9.14□□□□□ -0.95
CLRN1-205ENST00000472224 IZUMO4Q1ZYL8 232 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 C15orf32Q32M92 178 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 C9orf66Q5T8R8 295 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 TRIQKQ629K1 86 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 FAM223AQ8IWN6 122 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 OR10W1Q8NGF6 305 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 OR6Q1Q8NGQ2 317 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 OR4A16Q8NH70 328 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
CLRN1-205ENST00000472224 SEC22AQ96IW7 307 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 TSC22D3Q99576 134 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 NAA60Q9H7X0 242 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 RANGRFQ9HD47 186 aaPredicted RBP9.14□□□□□ -0.95
CLRN1-205ENST00000472224 SLC2A8Q9NY64 477 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 PRNDQ9UKY0 176 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 S4R3C0 116 aa9.14□□□□□ -0.95
CLRN1-205ENST00000472224 SAP30O75446 220 aa9.13□□□□□ -0.95
CLRN1-205ENST00000472224 BRI3O95415 125 aa9.13□□□□□ -0.95
CLRN1-205ENST00000472224 OR13C7P0DN81 318 aa9.13□□□□□ -0.95
CLRN1-205ENST00000472224 CTRB1P17538 263 aa9.13□□□□□ -0.95
CLRN1-205ENST00000472224 ZP3P21754 424 aa9.13□□□□□ -0.95
CLRN1-205ENST00000472224 KRTAP10-11P60412 298 aa9.13□□□□□ -0.95
CLRN1-205ENST00000472224 SURF2Q15527 256 aaPredicted RBP9.13□□□□□ -0.95
CLRN1-205ENST00000472224 CTRB2Q6GPI1 263 aa9.13□□□□□ -0.95
CLRN1-205ENST00000472224 NECAP1Q8NC96 275 aa9.13□□□□□ -0.95
CLRN1-205ENST00000472224 LSM10Q969L4 123 aaKnown RBP9.13□□□□□ -0.95
CLRN1-205ENST00000472224 RTBDNQ9BSG5 229 aaPredicted RBP9.13□□□□□ -0.95
CLRN1-205ENST00000472224 SRRQ9GZT4 340 aa9.13□□□□□ -0.95
CLRN1-205ENST00000472224 C5orf66Q9H5L9 145 aa9.13□□□□□ -0.95
CLRN1-205ENST00000472224 PEF1Q9UBV8 284 aaKnown RBP9.13□□□□□ -0.95
CLRN1-205ENST00000472224 TRBV9A0A0B4J1U6 114 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 LINC00854A0A1B0GVQ3 168 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 DBX1A6NMT0 343 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 ATG12O94817 140 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 NDUFB8O95169 186 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 IGKV1-5P01602 117 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 CRYGCP07315 174 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 FGF2P09038 288 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 AKR1C4P17516 323 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 RPEL1Q2QD12 228 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 SPINK9Q5DT21 86 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 THOC7Q6I9Y2 204 aaKnown RBP9.12□□□□□ -0.95
CLRN1-205ENST00000472224 ZNF343Q6P1L6 599 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 TMED4Q7Z7H5 227 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 OR5B3Q8NH48 314 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 EEF1AKMT3Q96AZ1 226 aa9.12□□□□□ -0.95
CLRN1-205ENST00000472224 SCGB3A2Q96PL1 93 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms