RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 ZNF137PP52743 207 aa15.16■□□□□ 0.02
COL20A1-205ENST00000471582 DLX6P56179 175 aa15.16■□□□□ 0.02
COL20A1-205ENST00000471582 ERVFRD-1P60508 538 aa15.16■□□□□ 0.02
COL20A1-205ENST00000471582 RAB31Q13636 194 aa15.16■□□□□ 0.02
COL20A1-205ENST00000471582 C1orf159Q96HA4 380 aa15.16■□□□□ 0.02
COL20A1-205ENST00000471582 FSTL3O95633 263 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 AKR1D1P51857 326 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 SNRPEP62304 92 aaKnown RBP15.15■□□□□ 0.02
COL20A1-205ENST00000471582 ADORA2A-AS1P86434 159 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 TMEM241Q24JQ0 296 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 TMEM155Q4W5P6 130 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 GCSAMLQ5JQS6 135 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 OR4F5Q8NH21 305 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 OR4F4Q96R69 305 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 TRBV23-1A0A0A0MS06 115 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 UBE2CO00762 179 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 PAGE4O60829 102 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 BSXQ3C1V8 233 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 IQCF2Q8IXL9 164 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 OR10X1Q8NGY0 326 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 LINC01560Q8TB33 94 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 HARBI1Q96MB7 349 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 TXNDC17Q9BRA2 123 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 PARLQ9H300 379 aa15.15■□□□□ 0.02
COL20A1-205ENST00000471582 TEX50A0A1B0GTY4 177 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 PDE6DO43924 150 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 STAG3L2P0CL84 134 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 STAG3L3P0CL85 134 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 DEFA4P12838 97 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 RPL35P42766 123 aaKnown RBP15.14■□□□□ 0.01
COL20A1-205ENST00000471582 RPL29P47914 159 aaKnown RBP15.14■□□□□ 0.01
COL20A1-205ENST00000471582 C2orf83Q53S99 150 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 MIC13Q5XKP0 118 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 ZNF343Q6P1L6 599 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 PDPNQ86YL7 162 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 OR4A5Q8NH83 315 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 GATAD1Q8WUU5 269 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 ST6GALNAC6Q969X2 333 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 HINT2Q9BX68 163 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 METTL1Q9UBP6 276 aaKnown RBP15.14■□□□□ 0.01
COL20A1-205ENST00000471582 RELNP78509 3460 aa15.14■□□□□ 0.01
COL20A1-205ENST00000471582 C11orf94C9JXX5 98 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 INS-IGF2F8WCM5 200 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 IGHV2-5P01817 119 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 MYOD1P15172 320 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 RPS10P46783 165 aaKnown RBP15.13■□□□□ 0.01
COL20A1-205ENST00000471582 OR4C13Q8NGP0 309 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 OR1L8Q8NGR8 309 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 OR9G1Q8NH87 305 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 RPUSD4Q96CM3 377 aaKnown RBP15.13■□□□□ 0.01
COL20A1-205ENST00000471582 FLYWCH2Q96CP2 140 aaKnown RBP15.13■□□□□ 0.01
COL20A1-205ENST00000471582 PCGF1Q9BSM1 259 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 ARFGEF3Q5TH69 2177 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 PKDREJQ9NTG1 2253 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 CXorf1O96002 111 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 OPN1MWP04001 364 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 CXCL1P09341 107 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 OPN1MW2P0DN77 364 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 OPN1MW3P0DN78 364 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 B2MP61769 119 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 VSTM2AQ8TAG5 236 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 NABP2Q9BQ15 211 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 PATZ1Q9HBE1 687 aaKnown RBP15.13■□□□□ 0.01
COL20A1-205ENST00000471582 URGCP-MRPS24S4R325 110 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 ADGRG4Q8IZF6 3080 aa15.13■□□□□ 0.01
COL20A1-205ENST00000471582 EPG5Q9HCE0 2579 aa15.12■□□□□ 0.01
COL20A1-205ENST00000471582 VENTXO95231 258 aa15.12■□□□□ 0.01
COL20A1-205ENST00000471582 USF1P22415 310 aaPredicted RBP15.12■□□□□ 0.01
COL20A1-205ENST00000471582 ZNF674Q2M3X9 581 aa15.12■□□□□ 0.01
COL20A1-205ENST00000471582 STPG3Q8N7X2 389 aa15.12■□□□□ 0.01
COL20A1-205ENST00000471582 CACNA1BQ00975 2339 aa15.12■□□□□ 0.01
COL20A1-205ENST00000471582 COL6A6A6NMZ7 2263 aa15.12■□□□□ 0.01
COL20A1-205ENST00000471582 IGHV1-8P0DP01 117 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 RPL8P62917 257 aaKnown RBP15.11■□□□□ 0.01
COL20A1-205ENST00000471582 PRR20EP86478 221 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 PRR20CP86479 221 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 PRR20DP86480 221 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 PRR20BP86481 221 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 PRR20AP86496 221 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 ADIRFQ15847 76 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 TMEM167AQ8TBQ9 72 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 NDUFA4L2Q9NRX3 87 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 IGSF10Q6WRI0 2623 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 TGIF2-C20orf24A0A0A6YYL0 155 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 F6UZH7 168 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 TGOLN2O43493 480 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 GRNP28799 593 aaKnown RBP15.11■□□□□ 0.01
COL20A1-205ENST00000471582 RHOBP62745 196 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 RPL23P62829 140 aaKnown RBP15.11■□□□□ 0.01
COL20A1-205ENST00000471582 SPNS3Q6ZMD2 512 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 TMEM144Q7Z5S9 345 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 NANPQ8TBE9 248 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 SSMEM1Q8WWF3 244 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 TNFRSF14Q92956 283 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 COMMD5Q9GZQ3 224 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 WASHC3Q9Y3C0 194 aa15.11■□□□□ 0.01
COL20A1-205ENST00000471582 NBASA2RRP1 2371 aa15.1■□□□□ 0.01
COL20A1-205ENST00000471582 TRBV24-1A0A075B6N3 115 aa15.1■□□□□ 0.01
COL20A1-205ENST00000471582 PLAUP00749 431 aa15.1■□□□□ 0.01
COL20A1-205ENST00000471582 ARL14EPLP0DKL9 152 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms