RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 FAM122CQ6P4D5 195 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 SPSB3Q6PJ21 355 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 ZNF833PQ6ZTB9 187 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 DTX2Q86UW9 622 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 PDPNQ86YL7 162 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 BOLLQ8N9W6 283 aaKnown RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 CLDND2Q8NHS1 167 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 SFT2D1Q8WV19 159 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 BSCL2Q96G97 398 aaPredicted RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 NIPSNAP3BQ9BS92 247 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 SCRT1Q9BWW7 348 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 ACTR3CQ9C0K3 210 aaPredicted RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 TMEM14BQ9NUH8 114 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 TMEM140Q9NV12 185 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 VAX2Q9UIW0 290 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 WDR83OSQ9Y284 106 aa4.63□□□□□ -1.67
HDAC8-216ENST00000470998 TEP1Q99973 2627 aaKnown RBP4.63□□□□□ -1.67
HDAC8-216ENST00000470998 AKAP6Q13023 2319 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 IGHV3OR15-7A0A075B7D8 119 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 SAA2-SAA4A0A096LPE2 208 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 IGHV3-43A0A0B4J1X8 118 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 LOC102723971A0A1B0GUV8 181 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 A0A1W2PN81 502 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 SMCO3A2RU48 225 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 MAP1LC3B2A6NCE7 125 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 PMS2P5A8MQ11 134 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 SHISA9B4DS77 424 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 SEC14L6B5MCN3 397 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 AGPAT2O15120 278 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 CYB5BO43169 146 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 CYB5R3P00387 301 aaPredicted RBP4.62□□□□□ -1.67
HDAC8-216ENST00000470998 PLAUP00749 431 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 MT-ND4LP03901 98 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 SAA2P0DJI9 122 aaPredicted RBP4.62□□□□□ -1.67
HDAC8-216ENST00000470998 IGHV3-43DP0DP04 118 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 MDKP21741 143 aaPredicted RBP4.62□□□□□ -1.67
HDAC8-216ENST00000470998 FGF7P21781 194 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 USF1P22415 310 aaPredicted RBP4.62□□□□□ -1.67
HDAC8-216ENST00000470998 MC5RP33032 325 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 CHRNA7P36544 502 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 OPRK1P41145 380 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 VDAC2P45880 294 aaPredicted RBP4.62□□□□□ -1.67
HDAC8-216ENST00000470998 HOXA1P49639 335 aaPredicted RBP4.62□□□□□ -1.67
HDAC8-216ENST00000470998 DSCR9P59020 149 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 BRWD1-AS2P59051 145 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 CCL8P80075 99 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 RUNX1Q01196 453 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 AKR1C1Q04828 323 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 CLEC12BQ2HXU8 276 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 HFEQ30201 348 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 AWAT1Q58HT5 328 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 CT45A1Q5HYN5 189 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 AVPI1Q5T686 147 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 BTNL3Q6UXE8 466 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 TCF23Q7RTU1 214 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 C5orf24Q7Z6I8 188 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 TPRX1Q8N7U7 411 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 SLC24A4Q8NFF2 622 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 CT45A3Q8NHU0 189 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 RFESDQ8TAC1 157 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 UBALD1Q8TB05 177 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 NANPQ8TBE9 248 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 BTF3L4Q96K17 158 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 C20orf173Q96LM9 149 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 OR4C12Q96R67 309 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 GPHA2Q96T91 129 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 SMR3AQ99954 134 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 C19orf24Q9BVV8 132 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 NPCDR1Q9BY65 106 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 MAP1LC3BQ9GZQ8 125 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 CHODLQ9H9P2 273 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 RPRMQ9NS64 109 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 TMEM242Q9NWH2 141 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 MLXQ9UH92 298 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 FAM96BQ9Y3D0 163 aa4.62□□□□□ -1.67
HDAC8-216ENST00000470998 AMMECR1Q9Y4X0 333 aaPredicted RBP4.62□□□□□ -1.67
HDAC8-216ENST00000470998 ABCA2Q9BZC7 2435 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 ZFHX3Q15911 3703 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 IGHV1-69-2A0A0G2JMI3 117 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 LOC105371267A0A1B0GV96 52 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 C15orf62A8K5M9 175 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 M0R036 132 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 TNFRSF13BO14836 293 aaPredicted RBP4.61□□□□□ -1.67
HDAC8-216ENST00000470998 PDE6DO43924 150 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 PROP1O75360 226 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 NXPH3O95157 252 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 MT-CO2P00403 227 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 IFNA10P01566 189 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 GYPAP02724 150 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 SOD3P08294 240 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 IL6RP08887 468 aaPredicted RBP4.61□□□□□ -1.67
HDAC8-216ENST00000470998 SRP19P09132 144 aaKnown RBP4.61□□□□□ -1.67
HDAC8-216ENST00000470998 CTRB1P17538 263 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 NDUFB7P17568 137 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 NPY1RP25929 384 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 CD1BP29016 333 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 MAS1LP35410 378 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 LGALS7P47929 136 aa4.61□□□□□ -1.67
HDAC8-216ENST00000470998 NPBWR1P48145 328 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms