RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 HIST1H2BJP06899 126 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 FABP1P07148 127 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 STAG3L2P0CL84 134 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 STAG3L3P0CL85 134 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 ARL14EPLP0DKL9 152 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 SELLP14151 372 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 HIST1H2BOP23527 126 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 GCHFRP30047 84 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 HIST1H2BBP33778 126 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 ZNF134P52741 427 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 HIST1H2BDP58876 126 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 UBE2G2P60604 165 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 HIST1H2BCP62807 126 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 LCN2P80188 198 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 ADIPOQQ15848 244 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 HIST2H2BEQ16778 126 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 VMA21Q3ZAQ7 101 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 C2orf83Q53S99 150 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.55□□□□□ -1.36
SMC4-212ENST00000470240 NCMAPQ5T1S8 102 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 MIC13Q5XKP0 118 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 SPNS3Q6ZMD2 512 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 SLC16A13Q7RTY0 426 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 PDPNQ86YL7 162 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 DOLPP1Q86YN1 238 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 ABHD12Q8N2K0 398 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 STPG3Q8N7X2 389 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 NECAP1Q8NC96 275 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 PRSS33Q8NF86 280 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 OR1L8Q8NGR8 309 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 H1FXQ92522 213 aaKnown RBP6.55□□□□□ -1.36
SMC4-212ENST00000470240 RND1Q92730 232 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 HIST1H2BHQ93079 126 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 ACY3Q96HD9 319 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 MGST2Q99735 147 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 HIST1H2BNQ99877 126 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 HIST1H2BMQ99879 126 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 OR51M1Q9H341 326 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 PATZ1Q9HBE1 687 aaKnown RBP6.55□□□□□ -1.36
SMC4-212ENST00000470240 Q9UFV3 132 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 SLC45A2Q9UMX9 530 aa6.55□□□□□ -1.36
SMC4-212ENST00000470240 RAI1Q7Z5J4 1906 aaPredicted RBP6.54□□□□□ -1.36
SMC4-212ENST00000470240 TRAV9-1A0A075B6T8 112 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 A0A1W2PPQ1 181 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 PRSS46E5RG02 174 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 PROP1O75360 226 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 TRGC1P0CF51 173 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 USF1P22415 310 aaPredicted RBP6.54□□□□□ -1.36
SMC4-212ENST00000470240 CCKARP32238 428 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 MC5RP33032 325 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 BPIFB3P59826 476 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 BSPH1Q075Z2 132 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 DNLZQ5SXM8 178 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 FAM201AQ5SY85 155 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 PQLC2Q6ZP29 291 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 ZNF833PQ6ZTB9 187 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 TMEM144Q7Z5S9 345 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 C8orf31Q8N9H6 132 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 OR5T1Q8NG75 326 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 OR4C13Q8NGP0 309 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 SSMEM1Q8WWF3 244 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 CACNG8Q8WXS5 425 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 C22orf15Q8WYQ4 148 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 NEUROG1Q92886 237 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 FLYWCH2Q96CP2 140 aaKnown RBP6.54□□□□□ -1.36
SMC4-212ENST00000470240 PYGO2Q9BRQ0 406 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 TMEM106BQ9NUM4 274 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 TECRQ9NZ01 308 aaKnown RBP6.54□□□□□ -1.36
SMC4-212ENST00000470240 SH3BGRL2Q9UJC5 107 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 WASHC3Q9Y3C0 194 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 LY96Q9Y6Y9 160 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 USF3Q68DE3 2245 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 DYSFO75923 2080 aa6.54□□□□□ -1.36
SMC4-212ENST00000470240 CACNA1DQ01668 2161 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 TRBV23-1A0A0A0MS06 115 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 TRAV3A0A0B4J244 114 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 DPRXA6NFQ7 191 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 TMEM178BH3BS89 294 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 GGCTO75223 188 aaKnown RBP6.53□□□□□ -1.36
SMC4-212ENST00000470240 YIF1AO95070 293 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 PFN1P07737 140 aaKnown RBP6.53□□□□□ -1.36
SMC4-212ENST00000470240 CD3EP07766 207 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 CT45A6P0DMU7 189 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 CT45A5P0DMU8 189 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 CT45A7P0DMV0 189 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 GPX4P36969 197 aaPredicted RBP6.53□□□□□ -1.36
SMC4-212ENST00000470240 ATP5G3P48201 142 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 TDGF1P3P51864 188 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 LINC00205P59089 165 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 RPL8P62917 257 aaKnown RBP6.53□□□□□ -1.36
SMC4-212ENST00000470240 EFNB3Q15768 340 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 SPRNQ5BIV9 151 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 ETFRF1Q6IPR1 90 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 LINC01551Q86U37 167 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 TMEM183AQ8IXX5 376 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 PNKDQ8N490 385 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 LINC00311Q8N616 119 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 OR51G1Q8NGK1 321 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 OR1L4Q8NGR5 311 aa6.53□□□□□ -1.36
SMC4-212ENST00000470240 OR9G1Q8NH87 305 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms