RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 ELLP55199 621 aaPredicted RBP11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 HERV-K104P61576 105 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 WT1-ASQ06250 92 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 ZNF585BQ52M93 769 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 SLC16A13Q7RTY0 426 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 LYSMD2Q8IV50 215 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 DMBX1Q8NFW5 382 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 VN1R17PQ8TDU5 208 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 BORCS5Q969J3 196 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 MARC2Q969Z3 335 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 MOB3AQ96BX8 217 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 YIPF6Q96EC8 236 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 ZNF2Q9BSG1 426 aaPredicted RBP11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 EHFQ9NZC4 300 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 THYN1Q9P016 225 aa11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 MRPL27Q9P0M9 148 aaKnown RBP11.07□□□□□ -0.64
SDCCAG3-209ENST00000468963 TRAV25A0A0B4J276 109 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 PMP2P02689 132 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 SERPINE2P07093 398 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 OR13C7P0DN81 318 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 GPR183P32249 361 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 LPAR6P43657 344 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 TAS2R20P59543 309 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 UBE2NLQ5JXB2 153 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 PLET1Q6UQ28 207 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 OR1L8Q8NGR8 309 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 IL17DQ8TAD2 202 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 FCAMRQ8WWV6 532 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 IFT46Q9NQC8 304 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 NDUFA4L2Q9NRX3 87 aa11.06□□□□□ -0.64
SDCCAG3-209ENST00000468963 IGHV3-35A0A0C4DH35 117 aa11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 SCAF4O95104 1147 aaKnown RBP11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 MFAP2P55001 183 aa11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 ANKRD55Q3KP44 614 aa11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 TMEM69Q5SWH9 247 aa11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 THOC7Q6I9Y2 204 aaKnown RBP11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 SLC25A24Q6NUK1 477 aa11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 BTNL8Q6UX41 500 aa11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 HSD17B13Q7Z5P4 300 aaPredicted RBP11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 SAMD12Q8N8I0 201 aa11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 GDPD1Q8N9F7 314 aa11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 OR52B4Q8NGK2 314 aa11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 DGCR14Q96DF8 476 aaKnown RBP11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 UFC1Q9Y3C8 167 aa11.05□□□□□ -0.64
SDCCAG3-209ENST00000468963 MARCH11A6NNE9 402 aa11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 TGOLN2O43493 480 aa11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 KRASP01116 189 aa11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 RLN1P04808 185 aa11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 PRSS3P35030 304 aa11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 TAS2R46P59540 309 aa11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 LSM3P62310 102 aaKnown RBP11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 OR5H2Q8NGV7 314 aa11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 OVOL2Q9BRP0 275 aa11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 C5orf66Q9H5L9 145 aa11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 NSG2Q9Y328 171 aa11.04□□□□□ -0.64
SDCCAG3-209ENST00000468963 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 GPR31O00270 319 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 CYB5BO43169 146 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 G6PCP35575 357 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 ERVK-16P61578 105 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 RBPMS2Q6ZRY4 209 aaKnown RBP11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 CMTM1Q8IZ96 169 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 OR6F1Q8NGZ6 308 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 GPX8Q8TED1 209 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 SCARB1Q8WTV0 552 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 TMEM190Q8WZ59 177 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 ATP6V0BQ99437 205 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 GGTLC1Q9BX51 225 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 OR51B2Q9Y5P1 312 aa11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 F11RQ9Y624 299 aaKnown RBP11.03□□□□□ -0.64
SDCCAG3-209ENST00000468963 A0A087WXM4 84 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 LOC102724200A0A096LPH7 203 aaPredicted RBP11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 OR2T8A6NH00 312 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 DBX1A6NMT0 343 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 K7EIM0 57 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 SPSB3Q6PJ21 355 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 OR2C3Q8N628 320 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 LSM10Q969L4 123 aaKnown RBP11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 SLC25A46Q96AG3 418 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 BSCL2Q96G97 398 aaPredicted RBP11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 ZNF414Q96IQ9 312 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 CHRDL1Q9BU40 450 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 HINT2Q9BX68 163 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 FXYD6Q9H0Q3 95 aa11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 FAM212BQ9NTI7 297 aaPredicted RBP11.02□□□□□ -0.65
SDCCAG3-209ENST00000468963 IGHV3-21A0A0B4J1V1 117 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 K7EMT4 169 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 NDUFA4O00483 81 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 TSPAN4O14817 238 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 SNAPC5O75971 98 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 EIF4EP06730 217 aaKnown RBP11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 HLA-DMAP28067 261 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 ADMP35318 185 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 HRH1P35367 487 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 TSPAN14Q8NG11 270 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 OR1L6Q8NGR2 347 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 CMTM3Q96MX0 182 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 SPAG8Q99932 426 aaPredicted RBP11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 TMEM14BQ9NUH8 114 aa11.01□□□□□ -0.65
SDCCAG3-209ENST00000468963 FKBP11Q9NYL4 201 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms