RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 OCC1Q8TAD7 63 aa13□□□□□ -0.33
TSPAN4-211ENST00000468468 DDB2Q92466 427 aa13□□□□□ -0.33
TSPAN4-211ENST00000468468 STARD4Q96DR4 205 aa13□□□□□ -0.33
TSPAN4-211ENST00000468468 OR2V2Q96R30 315 aa13□□□□□ -0.33
TSPAN4-211ENST00000468468 LPAR2Q9HBW0 351 aa13□□□□□ -0.33
TSPAN4-211ENST00000468468 LSM4Q9Y4Z0 139 aaKnown RBP13□□□□□ -0.33
TSPAN4-211ENST00000468468 SPTBN2O15020 2390 aa13□□□□□ -0.33
TSPAN4-211ENST00000468468 TRGV8A0A0C4DH27 118 aa12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 TET2Q6N021 2002 aaPredicted RBP12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 INTS1Q8N201 2190 aaKnown RBP12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 C15orf61A6NNL5 157 aa12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 GCHFRP30047 84 aa12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 ZNF83P51522 516 aa12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 SPATA31B1PQ5VZV4 182 aa12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 TCF23Q7RTU1 214 aa12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 SEPSECSQ9HD40 501 aaKnown RBP12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 POLR3KQ9Y2Y1 108 aaPredicted RBP12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 SLC25A15Q9Y619 301 aa12.99□□□□□ -0.33
TSPAN4-211ENST00000468468 AHRRA9YTQ3 701 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 NPY1RP25929 384 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 CFHR2P36980 270 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 EFNB3Q15768 340 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 TEPPQ6URK8 271 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 RPRMLQ8N4K4 120 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 STPG3Q8N7X2 389 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 OR10G8Q8NGN5 311 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 LRFN3Q9BTN0 628 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 HEATR1Q9H583 2144 aaKnown RBP12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 PTPRZ1P23471 2315 aaPredicted RBP12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 A0A1B0GUS0 222 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 CGAP01215 116 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 COL8A2P25067 703 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 TIMP3P35625 211 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 THBS3P49746 956 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 RAB7AP51149 207 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 RBX1P62877 108 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 CT45A1Q5HYN5 189 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 FAM201AQ5SY85 155 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 OR4A47Q6IF82 309 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 TMEM256Q8N2U0 113 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 SLC24A4Q8NFF2 622 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 CT45A3Q8NHU0 189 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 CACNA1GO43497 2377 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 SIAH2O43255 324 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 SPRY3O43610 288 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 FOXH1O75593 365 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 RHOBP62745 196 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 C17orf58Q2M2W7 97 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 SAPCD1Q5SSQ6 148 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 ENY2Q9NPA8 101 aa12.98□□□□□ -0.33
TSPAN4-211ENST00000468468 SAA2-SAA4A0A096LPE2 208 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 M0R1B8 84 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 SCGB1D1O95968 90 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 SAA2P0DJI9 122 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 CGB3P0DN86 165 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 CGB7P0DN87 165 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 HSPE1P61604 102 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 RPL31P62899 125 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 OR5I1Q13606 314 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 VHLLQ6RSH7 139 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 IGFL3Q6UXB1 125 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 HINT2Q9BX68 163 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 CA2P00918 260 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 CRYABP02511 175 aaKnown RBP12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 ADMP35318 185 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 RAB31Q13636 194 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 IQCJQ1A5X6 159 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 ASCL5Q7RTU5 278 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 ITLN1Q8WWA0 313 aa12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 FOXA2Q9Y261 457 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-211ENST00000468468 NUPR1O60356 82 aa12.96□□□□□ -0.33
TSPAN4-211ENST00000468468 MYOD1P15172 320 aa12.96□□□□□ -0.33
TSPAN4-211ENST00000468468 Q6ZS92 163 aa12.96□□□□□ -0.33
TSPAN4-211ENST00000468468 OR4P4Q8NGL7 312 aa12.96□□□□□ -0.33
TSPAN4-211ENST00000468468 TMEM14BQ9NUH8 114 aa12.96□□□□□ -0.33
TSPAN4-211ENST00000468468 ATMQ13315 3056 aa12.96□□□□□ -0.33
TSPAN4-211ENST00000468468 MT-CO2P00403 227 aa12.96□□□□□ -0.34
TSPAN4-211ENST00000468468 ZNF90Q03938 601 aa12.96□□□□□ -0.34
TSPAN4-211ENST00000468468 RBMXL3Q8N7X1 1067 aaKnown RBP12.96□□□□□ -0.34
TSPAN4-211ENST00000468468 FAM169BQ8N8A8 192 aa12.96□□□□□ -0.34
TSPAN4-211ENST00000468468 FKBP11Q9NYL4 201 aa12.96□□□□□ -0.34
TSPAN4-211ENST00000468468 DMXL2Q8TDJ6 3036 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 ITGB1BP1O14713 200 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 LHBP01229 141 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 IGFBP2P18065 325 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 BRS3P32247 399 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 KLF3P57682 345 aaPredicted RBP12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 LYG1Q8N1E2 194 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 CHODLQ9H9P2 273 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 DNAJC4Q9NNZ3 241 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 K7EN84 100 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 SLC17A3O00476 420 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 YPEL3P61236 119 aaPredicted RBP12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 HLA-DRB5Q30154 266 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 IDI2-AS1Q9NZ38 188 aa12.95□□□□□ -0.34
TSPAN4-211ENST00000468468 KBTBD11-OT1A0A1B0GTJ5 212 aa12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 MBD3L4A6NDZ8 208 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 MBD3L3A6NE82 208 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 MBD3L5A6NJ08 208 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-211ENST00000468468 ACTL6BO94805 426 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms