RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 TEX13DA0A0J9YY54 714 aaPredicted RBP3.92□□□□□ -1.78
U2AF1-207ENST00000468039 CCDC160A6NGH7 325 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 A6NJ64 397 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 NCBP2LA6PVI3 153 aaKnown RBP3.92□□□□□ -1.78
U2AF1-207ENST00000468039 FAM25AB3EWG3 89 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 FAM25CB3EWG5 89 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 FAM25GB3EWG6 89 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 PRAC2D3DTV9 90 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 H3BMQ9 156 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 HLA-DQB1P01920 261 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 APOA1P02647 267 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 FAM106CPP0CH98 169 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 CT45A6P0DMU7 189 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 CT45A5P0DMU8 189 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 CT45A7P0DMV0 189 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 IGKV1-13P0DP09 117 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 DUTP33316 252 aaKnown RBP3.92□□□□□ -1.78
U2AF1-207ENST00000468039 KIR2DS4P43632 304 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 VDAC2P45880 294 aaPredicted RBP3.92□□□□□ -1.78
U2AF1-207ENST00000468039 RORCP51449 518 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 KIR2DS1Q14954 304 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 C10orf99Q6UWK7 81 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 FAM131AQ6UXB0 335 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 ERASQ7Z444 233 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 H1FOOQ8IZA3 346 aaPredicted RBP3.92□□□□□ -1.78
U2AF1-207ENST00000468039 Q8N6K4 173 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 C5orf56Q8N8D9 126 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 OR10J5Q8NHC4 309 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 OR2T6Q8NHC8 308 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 RAB2BQ8WUD1 216 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 ISOC1Q96CN7 298 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 S100A16Q96FQ6 103 aaKnown RBP3.92□□□□□ -1.78
U2AF1-207ENST00000468039 GINS4Q9BRT9 223 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 AGMATQ9BSE5 352 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 OR2D2Q9H210 308 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 ABCG5Q9H222 651 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 MIXL1Q9H2W2 232 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 RANBP3Q9H6Z4 567 aaPredicted RBP3.92□□□□□ -1.78
U2AF1-207ENST00000468039 SDHAF2Q9NX18 166 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 PIPOXQ9P0Z9 390 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 ANXA10Q9UJ72 324 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 LINC00527Q9UJ94 153 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 MGAT4AQ9UM21 535 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 MOB4Q9Y3A3 225 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 RBM7Q9Y580 266 aaKnown RBP3.92□□□□□ -1.78
U2AF1-207ENST00000468039 MMP24Q9Y5R2 645 aa3.92□□□□□ -1.78
U2AF1-207ENST00000468039 IFITM10A6NMD0 228 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 C15orf62A8K5M9 175 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 M0R1X1 148 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 ITGB1BP1O14713 200 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 RAB29O14966 203 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 RGS5O15539 181 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 MOSP00540 346 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 PMP2P02689 132 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 CD28P10747 220 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 AADACP22760 399 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 CD1BP29016 333 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 TMBIM6P55061 237 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 ATP5IP56385 69 aaPredicted RBP3.91□□□□□ -1.78
U2AF1-207ENST00000468039 FXYD4P59646 89 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 ARPC4P59998 168 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 ACTBP60709 375 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 HERV-K104P63124 156 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 CX3CL1P78423 397 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 PITPNAQ00169 270 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 EBI3Q14213 229 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 ARL6IP1Q15041 203 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 MMDQ15546 238 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 LY6G6FQ5SQ64 297 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 OR4A47Q6IF82 309 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 CNIH2Q6PI25 160 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 Q6ZS49 121 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 HOGA1Q86XE5 327 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 Q8N2B8 174 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 Q8N9W7 124 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 ZNF383Q8NA42 475 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 BEST4Q8NFU0 473 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 OR2T10Q8NGZ9 312 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 DYNC2LI1Q8TCX1 351 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 ACOT12Q8WYK0 555 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 AP3S1Q92572 193 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 NOL4LQ96MY1 436 aaPredicted RBP3.91□□□□□ -1.78
U2AF1-207ENST00000468039 S1PR3Q99500 378 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 HSPB9Q9BQS6 159 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 ALKBH7Q9BT30 221 aaPredicted RBP3.91□□□□□ -1.78
U2AF1-207ENST00000468039 DCUN1D5Q9BTE7 237 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 GON7Q9BXV9 100 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 C6orf62Q9GZU0 229 aaPredicted RBP3.91□□□□□ -1.78
U2AF1-207ENST00000468039 TOLLIPQ9H0E2 274 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 IFT46Q9NQC8 304 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 PLSCR3Q9NRY6 295 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 ZNF221Q9UK13 617 aa3.91□□□□□ -1.78
U2AF1-207ENST00000468039 A0A1B0GUS0 222 aa3.9□□□□□ -1.79
U2AF1-207ENST00000468039 SMIM31A0A1B0GVY4 71 aa3.9□□□□□ -1.79
U2AF1-207ENST00000468039 RNF222A6NCQ9 220 aa3.9□□□□□ -1.79
U2AF1-207ENST00000468039 H0YJW9 148 aa3.9□□□□□ -1.79
U2AF1-207ENST00000468039 H7C2Y5 167 aa3.9□□□□□ -1.79
U2AF1-207ENST00000468039 NBR2O15453 112 aa3.9□□□□□ -1.79
U2AF1-207ENST00000468039 TNFSF12O43508 249 aa3.9□□□□□ -1.79
U2AF1-207ENST00000468039 IGKV1-16P04430 117 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms