RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 SLC2A9Q9NRM0 540 aa5.56□□□□□ -1.52
SCAF4-204ENST00000467731 A0A0U1RQK1 487 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 ZNF320A2RRD8 509 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 H0Y8G0 127 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 PPP1R2P9O14990 202 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 CYB5BO43169 146 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 CD99P14209 185 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 HTR1DP28221 377 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 SAA4P35542 130 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 REG1BP48304 166 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 LGALS4P56470 323 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 PIGPP57054 158 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 LINC00205P59089 165 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 GUK1Q16774 197 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 ABCA11PQ4W5N1 156 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 CMTM1Q8IZ96 169 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 ADAD2Q8NCV1 583 aaKnown RBP5.55□□□□□ -1.52
SCAF4-204ENST00000467731 STXBP6Q8NFX7 210 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 SCGB3A2Q96PL1 93 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 DOK5Q9P104 306 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 C14orf166Q9Y224 244 aaKnown RBP5.55□□□□□ -1.52
SCAF4-204ENST00000467731 TEP1Q99973 2627 aaKnown RBP5.55□□□□□ -1.52
SCAF4-204ENST00000467731 IGHV1-69DA0A0B4J2H0 117 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 SMCO3A2RU48 225 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 IGHV1-69P01742 117 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 CTSDP07339 412 aaPredicted RBP5.55□□□□□ -1.52
SCAF4-204ENST00000467731 ZNF137PP52743 207 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 KHDC3LQ587J8 217 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 ST6GALNAC6Q969X2 333 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 AKR1E2Q96JD6 320 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 S1PR3Q99500 378 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 ACTR3CQ9C0K3 210 aaPredicted RBP5.55□□□□□ -1.52
SCAF4-204ENST00000467731 BEX1Q9HBH7 125 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 UQCC1Q9NVA1 299 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 SMPXQ9UHP9 88 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 AMMECR1Q9Y4X0 333 aaPredicted RBP5.55□□□□□ -1.52
SCAF4-204ENST00000467731 HILPDAQ9Y5L2 63 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 NIPBLQ6KC79 2804 aaeCLIP5.55□□□□□ -1.526e-8■■■■■ 30.6
SCAF4-204ENST00000467731 LINC00473A8K010 186 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 NPFFO15130 113 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 CCL25O15444 150 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 IL6RP08887 468 aaPredicted RBP5.55□□□□□ -1.52
SCAF4-204ENST00000467731 RPA2P15927 270 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 AKR1C4P17516 323 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 IL3RAP26951 378 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 BRS3P32247 399 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 AKR1C2P52895 323 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 AKR1C1Q04828 323 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 ZNF833PQ6ZTB9 187 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 HIST3H2BBQ8N257 126 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.55□□□□□ -1.52
SCAF4-204ENST00000467731 RTN4IP1Q8WWV3 396 aaPredicted RBP5.55□□□□□ -1.52
SCAF4-204ENST00000467731 TMEM230Q96A57 120 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 RPEQ96AT9 228 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 YAE1D1Q9NRH1 226 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 DPM3Q9P2X0 92 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 NF1P21359 2839 aa5.55□□□□□ -1.52
SCAF4-204ENST00000467731 A0A1B0GV72 72 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 LY6LH3BQJ8 138 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 M0R1X1 148 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 PGLYRP1O75594 196 aaPredicted RBP5.54□□□□□ -1.52
SCAF4-204ENST00000467731 LY6G6DO95868 133 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 DUTP33316 252 aaKnown RBP5.54□□□□□ -1.52
SCAF4-204ENST00000467731 MAS1LP35410 378 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 AKR1C3P42330 323 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 F2RL1P55085 397 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 RPL30P62888 115 aaKnown RBP5.54□□□□□ -1.52
SCAF4-204ENST00000467731 EIF4EBP1Q13541 118 aaPredicted RBP5.54□□□□□ -1.52
SCAF4-204ENST00000467731 MIDNQ504T8 468 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 MINOS1Q5TGZ0 78 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 IL17RELQ6ZVW7 336 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 TBC1D26Q86UD7 250 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 ZBTB34Q8NCN2 500 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 OR1S2Q8NGQ3 325 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 OR51H1Q8NH63 302 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 RBMXL1Q96E39 390 aaKnown RBP5.54□□□□□ -1.52
SCAF4-204ENST00000467731 PHYHIPLQ96FC7 376 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 AJUBAQ96IF1 538 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 CHIAQ9BZP6 476 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 TBL2Q9Y4P3 447 aaKnown RBP5.54□□□□□ -1.52
SCAF4-204ENST00000467731 MINOS1-NBL1R4GNA1 71 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 PRAF2O60831 178 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 OR2A4O95047 310 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 FSHBP01225 129 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 CLEC3BP05452 202 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 CT45A6P0DMU7 189 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 CT45A5P0DMU8 189 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 CT45A7P0DMV0 189 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 MSMO1Q15800 293 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 TMEM128Q5BJH2 165 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 FAM120AOSQ5T036 256 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 TPTE2P1Q5T6R2 138 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 FAM71F2Q6NXP2 309 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 GLDNQ6ZMI3 551 aaPredicted RBP5.54□□□□□ -1.52
SCAF4-204ENST00000467731 SLC25A42Q86VD7 318 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 DYNAPQ8N1N2 210 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 OR1L6Q8NGR2 347 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 DPF1Q92782 380 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 OR2A7Q96R45 310 aa5.54□□□□□ -1.52
SCAF4-204ENST00000467731 MRPL20Q9BYC9 149 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms