RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 RBM38Q9H0Z9 239 aaKnown RBP10.78□□□□□ -0.68
CCHCR1-211ENST00000467553 COPZ2Q9P299 210 aa10.78□□□□□ -0.68
CCHCR1-211ENST00000467553 FBXL7Q9UJT9 491 aa10.78□□□□□ -0.68
CCHCR1-211ENST00000467553 CRYGCP07315 174 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 TRAPPC2P0DI81 140 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 TRAPPC2BP0DI82 140 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 CTRB1P17538 263 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 RND3P61587 244 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 EXOSC2Q13868 293 aaKnown RBP10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 PYDC2Q56P42 97 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 CTRB2Q6GPI1 263 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 H2BFWTQ7Z2G1 175 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 OR4C16Q8NGL9 310 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 OR1L8Q8NGR8 309 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 OR13C8Q8NGS7 320 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 FANCD2OSQ96PS1 177 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 OR4C12Q96R67 309 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 THAP7Q9BT49 309 aaPredicted RBP10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 ELOVL1Q9BW60 279 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 QTRT1Q9BXR0 403 aaKnown RBP10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 FAM212BQ9NTI7 297 aaPredicted RBP10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 OR51B2Q9Y5P1 312 aa10.77□□□□□ -0.69
CCHCR1-211ENST00000467553 C3orf85A0A1B0GTC6 90 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 ANKRD20A5PA0PJZ0 165 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 NDUFB8O95169 186 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 IGKV1-39P01597 117 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 IGHV3-23P01764 117 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 IGKV1D-39P04432 117 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 GP9P14770 177 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 PTBP1P26599 531 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 TATDN3Q17R31 274 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 C15orf32Q32M92 178 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 SP6Q3SY56 376 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 CCDC71LQ8N9Z2 235 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 OR4A16Q8NH70 328 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 MRGPRFQ96AM1 343 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 SEC22AQ96IW7 307 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 TP53RKQ96S44 253 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 TSC22D3Q99576 134 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 ASCL2Q99929 193 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 ZMAT4Q9H898 229 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 C14orf166Q9Y224 244 aaKnown RBP10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 S4R3C0 116 aa10.76□□□□□ -0.69
CCHCR1-211ENST00000467553 IGLC7A0M8Q6 106 aa10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 ZNF701M0R085 212 aaPredicted RBP10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 CTSDP07339 412 aaPredicted RBP10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 OR13C7P0DN81 318 aa10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 HIST1H1BP16401 226 aaKnown RBP10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 SYNJ2BPP57105 145 aa10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 KLF5Q13887 457 aaPredicted RBP10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 RPEL1Q2QD12 228 aa10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 CADM3Q8N126 398 aa10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 OR51S1Q8NGJ8 323 aa10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 NDUFA4L2Q9NRX3 87 aa10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 MCUBQ9NWR8 336 aa10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 FKBP11Q9NYL4 201 aa10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 PRNDQ9UKY0 176 aa10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 DYNC2H1Q8NCM8 4307 aaKnown RBP10.75□□□□□ -0.69
CCHCR1-211ENST00000467553 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 TEX13DA0A0J9YY54 714 aaPredicted RBP10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 DBX1A6NMT0 343 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 H0Y980 276 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 FGF2P09038 288 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 SPNP16150 400 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 MECP2P51608 486 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 TRIM16LQ309B1 348 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 THOC7Q6I9Y2 204 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 SLC25A24Q6NUK1 477 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 Q8N402 240 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 MUC7Q8TAX7 377 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 PRRT1Q99946 306 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 SRSF8Q9BRL6 282 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 RTBDNQ9BSG5 229 aaPredicted RBP10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 SCP2D1Q9UJQ7 156 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 GPR132Q9UNW8 380 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 LYSTQ99698 3801 aa10.74□□□□□ -0.69
CCHCR1-211ENST00000467553 IGLV11-55A0A075B6I3 123 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 C15orf61A6NNL5 157 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 A8MZ25 164 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 PPP5D1E7EU14 171 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 BMPR1BO00238 502 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 WT1-ASQ06250 92 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 IZUMO4Q1ZYL8 232 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 CLEC19AQ6UXS0 136 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 SBSPONQ8IVN8 264 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 EEF1AKMT3Q96AZ1 226 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 TMEM56Q96MV1 263 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 RCHY1Q96PM5 261 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 TMEM14BQ9NUH8 114 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 V9GYH0 126 aa10.73□□□□□ -0.69
CCHCR1-211ENST00000467553 CYB5BO43169 146 aa10.72□□□□□ -0.69
CCHCR1-211ENST00000467553 ATG12O94817 140 aa10.72□□□□□ -0.69
CCHCR1-211ENST00000467553 OR2C1O95371 312 aa10.72□□□□□ -0.69
CCHCR1-211ENST00000467553 HLA-AP01891 365 aaKnown RBP10.72□□□□□ -0.69
CCHCR1-211ENST00000467553 FRMD6-AS1P0C7T7 363 aa10.72□□□□□ -0.69
CCHCR1-211ENST00000467553 AKR1C2P52895 323 aa10.72□□□□□ -0.69
CCHCR1-211ENST00000467553 HSD17B13Q7Z5P4 300 aaPredicted RBP10.72□□□□□ -0.69
CCHCR1-211ENST00000467553 CCDC190Q86UF4 302 aa10.72□□□□□ -0.69
CCHCR1-211ENST00000467553 HAPLN4Q86UW8 402 aa10.72□□□□□ -0.69
CCHCR1-211ENST00000467553 TOMM5Q8N4H5 51 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms