RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 OR13C4Q8NGS5 318 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 OR5J2Q8NH18 312 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 MCFD2Q8NI22 146 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 CEP19Q96LK0 163 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 IMMP2LQ96T52 175 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 KLF6Q99612 283 aaPredicted RBP1.98□□□□□ -2.09
SMC4-208ENST00000467468 PHB2Q99623 299 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 C11orf68Q9H3H3 251 aaKnown RBP1.98□□□□□ -2.09
SMC4-208ENST00000467468 UQCC1Q9NVA1 299 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 ROBO3Q96MS0 1386 aa1.98□□□□□ -2.09
SMC4-208ENST00000467468 SIPA1L1O43166 1804 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 EXOC1LA0A1B0GW35 172 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 FAM159BA6NKW6 160 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 PIRO00625 290 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 CREBL2O60519 120 aaPredicted RBP1.97□□□□□ -2.09
SMC4-208ENST00000467468 SERPINE1P05121 402 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 SMIM10L2AP0DMW4 78 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 SMIM10L2BP0DMW5 78 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 CYBAP13498 195 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 CBR1P16152 277 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 HIST1H2BOP23527 126 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 PSMB8P28062 276 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 HIST1H2BBP33778 126 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 HIST1H2BDP58876 126 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 DEFA1P59665 94 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 HIST1H2BCP62807 126 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 SS18Q15532 418 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 HIST2H2BEQ16778 126 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.97□□□□□ -2.09
SMC4-208ENST00000467468 IBA57Q5T440 356 aaKnown RBP1.97□□□□□ -2.09
SMC4-208ENST00000467468 RPL22L1Q6P5R6 122 aaKnown RBP1.97□□□□□ -2.09
SMC4-208ENST00000467468 LYZL1Q6UWQ5 148 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 DYNAPQ8N1N2 210 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 AP3S1Q92572 193 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 HIST1H2BHQ93079 126 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 TOMM6Q96B49 74 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 HIST1H2BNQ99877 126 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 HIST1H2BMQ99879 126 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 OR8D2Q9GZM6 311 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 ARMC1Q9NVT9 282 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 NDUFB11Q9NX14 153 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 HHLA3Q9XRX5 114 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 SAMHD1Q9Y3Z3 626 aaKnown RBP1.97□□□□□ -2.09
SMC4-208ENST00000467468 HECW2Q9P2P5 1572 aa1.97□□□□□ -2.09
SMC4-208ENST00000467468 EIF3AQ14152 1382 aaKnown RBP1.97□□□□□ -2.09
SMC4-208ENST00000467468 TTC21AQ8NDW8 1320 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 TRAV9-1A0A075B6T8 112 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 IGKV1D-43A0A0B4J1Z2 117 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 DPRXA6NFQ7 191 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 C3orf84H3BNL1 204 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 KLRC4O43908 158 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 OR5F1O95221 314 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 ZNF682O95780 498 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 IGKV1-5P01602 117 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 LGALS1P09382 135 aaKnown RBP1.96□□□□□ -2.1
SMC4-208ENST00000467468 RBP1P09455 135 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 HLA-DMBP28068 263 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 RPL28P46779 137 aaKnown RBP1.96□□□□□ -2.1
SMC4-208ENST00000467468 TPI1P60174 286 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 RAB14P61106 215 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 ZNF90Q03938 601 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 AADACL3Q5VUY0 350 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 ZNF705AQ6ZN79 300 aaPredicted RBP1.96□□□□□ -2.1
SMC4-208ENST00000467468 SLC36A1Q7Z2H8 476 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 SLC35E3Q7Z769 313 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 KRT222Q8N1A0 295 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 MRPS24Q96EL2 167 aaKnown RBP1.96□□□□□ -2.1
SMC4-208ENST00000467468 DNAJC30Q96LL9 226 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 DERL1Q9BUN8 251 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 TP73-AS1Q9UF72 201 aa1.96□□□□□ -2.1
SMC4-208ENST00000467468 FAM32AQ9Y421 112 aaKnown RBP1.96□□□□□ -2.1
SMC4-208ENST00000467468 ATG2BQ96BY7 2078 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 CAMSAP1Q5T5Y3 1602 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 IGHV3-64A0A075B6Q5 118 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 IRGMA1A4Y4 181 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 GGT3PA6NGU5 568 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 FABP5P3A8MUU1 101 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 H3BT86 120 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 IGHV3-7P01780 117 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 MSMBP08118 114 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 SULT1A3P0DMM9 295 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 SULT1A4P0DMN0 295 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 MSNP26038 577 aaKnown RBP1.95□□□□□ -2.1
SMC4-208ENST00000467468 SERPINB9P50453 376 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 EMP1P54849 157 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 MEF2BQ02080 365 aaPredicted RBP1.95□□□□□ -2.1
SMC4-208ENST00000467468 OR11H6Q8NGC7 330 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 OR51T1Q8NGJ9 327 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 SLC7A6Q92536 515 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 PRRT1Q99946 306 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 CCDC90BQ9GZT6 254 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 ENY2Q9NPA8 101 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 PRO2289Q9P1D8 64 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 OPTCQ9UBM4 332 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 TIMM22Q9Y584 194 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 TIMM9Q9Y5J7 89 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 RTL1A6NKG5 1358 aa1.95□□□□□ -2.1
SMC4-208ENST00000467468 NEO1Q92859 1461 aa1.94□□□□□ -2.1
SMC4-208ENST00000467468 TRAV7A0A075B6U4 112 aa1.94□□□□□ -2.1
SMC4-208ENST00000467468 hCG_1818297A0A087WSY0 165 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms