RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 RUNX1Q01196 453 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 ZNF90Q03938 601 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 RPL18Q07020 188 aaKnown RBP1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 HES1Q14469 280 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 IAH1Q2TAA2 248 aaPredicted RBP1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 LYZL1Q6UWQ5 148 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 OR6V1Q8N148 313 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 ZNF676Q8N7Q3 588 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 OR8B12Q8NGG6 310 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 MRPL30Q8TCC3 161 aaKnown RBP1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 BTF3L4Q96K17 158 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 NIPSNAP1Q9BPW8 284 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 TMEM147Q9BVK8 224 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 FBXL12Q9NXK8 326 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 TIMM22Q9Y584 194 aa1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 NYNRINQ9P2P1 1898 aaKnown RBP1.68□□□□□ -2.14
PRPF40A-205ENST00000467114 CCDC144AA2RUR9 1427 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 IGHV3-64A0A075B6Q5 118 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 hADV38S2A0JD32 116 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 LY6LH3BQJ8 138 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 PDE6DO43924 150 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 C1QAP02745 245 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 LGALS1P09382 135 aaKnown RBP1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 ERHP84090 104 aaKnown RBP1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 SLC7A6Q92536 515 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 TSPAN32Q96QS1 320 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 KIFC1Q9BW19 673 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 OR8D2Q9GZM6 311 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 RNASE7Q9H1E1 156 aaKnown RBP1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 C11orf68Q9H3H3 251 aaKnown RBP1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 NMNAT1Q9HAN9 279 aaPredicted RBP1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 C14orf105Q9NVL8 296 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 IDI2-AS1Q9NZ38 188 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 TMEM56-RWDD3S4R434 201 aa1.67□□□□□ -2.14
PRPF40A-205ENST00000467114 ADGRL3Q9HAR2 1447 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 TRAV7A0A075B6U4 112 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 TRAV38-1A0A0B4J264 116 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 A0A0G2JQZ4 141 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 FABP5P3A8MUU1 101 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 H7C2G1 150 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 J3QQQ9 107 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 PIRO00625 290 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 OR7C1O76099 320 aaPredicted RBP1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 SULT1A3P0DMM9 295 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 SULT1A4P0DMN0 295 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 NEFHP12036 1026 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST1H2BOP23527 126 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 PEBP1P30086 187 aaKnown RBP1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST1H2BBP33778 126 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 EMP1P54849 157 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST1H2BDP58876 126 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 RPL26P61254 145 aaKnown RBP1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 ARF6P62330 175 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST1H4AP62805 103 aaKnown RBP1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST1H2BCP62807 126 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST2H2BEQ16778 126 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 LIN52Q52LA3 116 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 IBA57Q5T440 356 aaKnown RBP1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 C9orf64Q5T6V5 341 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 AADACL3Q5VUY0 350 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 RPL22L1Q6P5R6 122 aaKnown RBP1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 S100A7AQ86SG5 101 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 RPP25LQ8N5L8 163 aaKnown RBP1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 OR51A2Q8NGJ7 313 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 CT55Q8WUE5 264 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST1H2BHQ93079 126 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 PHB2Q99623 299 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST1H2BNQ99877 126 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 HIST1H2BMQ99879 126 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 TTTY12Q9BZ98 90 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 VCX3BQ9H321 246 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 UQCC1Q9NVA1 299 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 PRO2289Q9P1D8 64 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 RPL26L1Q9UNX3 145 aaKnown RBP1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 NUP155O75694 1391 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 SCN9AQ15858 1988 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 ARHGAP32A7KAX9 2087 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 SLX4Q8IY92 1834 aa1.66□□□□□ -2.14
PRPF40A-205ENST00000467114 RALGAPA2Q2PPJ7 1873 aa1.65□□□□□ -2.14
PRPF40A-205ENST00000467114 VWDEQ8N2E2 1590 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 REREQ9P2R6 1566 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 TRAV9-1A0A075B6T8 112 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 TMSB15BA0A087X1C1 80 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 IGKV1D-43A0A0B4J1Z2 117 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 IGHV1-18A0A0C4DH31 117 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 EXOC1LA0A1B0GW35 172 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 IRGMA1A4Y4 181 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 ARRDC5A6NEK1 342 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 DPRXA6NFQ7 191 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 H3BRN7 92 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 IGHV3-7P01780 117 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 MSMBP08118 114 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 CST2P09228 141 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 P0DMU3 169 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 FAM231AP0DMU4 169 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 FAM231CP0DMU5 169 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 DEFA4P12838 97 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 EVX1P49640 407 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 TMEM258P61165 79 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms