RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 CRYGCP07315 174 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 AREGP15514 252 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 PSMB6P28072 239 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 TPPP2P59282 170 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 IFITM3Q01628 133 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 IZUMO4Q1ZYL8 232 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 MZT2BQ6NZ67 158 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 C18orf65Q6ZTR6 163 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 HSD17B13Q7Z5P4 300 aaPredicted RBP14.3□□□□□ -0.12
HOXA9-203ENST00000465941 ZNF429Q86V71 674 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 LGI3Q8N145 548 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 KLHL30-AS1Q8NEE0 82 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 C4orf3Q8WVX3 66 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 LSM10Q969L4 123 aaKnown RBP14.3□□□□□ -0.12
HOXA9-203ENST00000465941 FLVCR2Q9UPI3 526 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 TNCP24821 2201 aa14.3□□□□□ -0.12
HOXA9-203ENST00000465941 SFT2D2O95562 160 aa14.29□□□□□ -0.12
HOXA9-203ENST00000465941 TCRBP04435 133 aa14.29□□□□□ -0.12
HOXA9-203ENST00000465941 CTRB1P17538 263 aa14.29□□□□□ -0.12
HOXA9-203ENST00000465941 VAMP1P23763 118 aa14.29□□□□□ -0.12
HOXA9-203ENST00000465941 RUNX1Q01196 453 aa14.29□□□□□ -0.12
HOXA9-203ENST00000465941 PPP1R1AQ13522 171 aa14.29□□□□□ -0.12
HOXA9-203ENST00000465941 CTRB2Q6GPI1 263 aa14.29□□□□□ -0.12
HOXA9-203ENST00000465941 TREML4Q6UXN2 200 aa14.29□□□□□ -0.12
HOXA9-203ENST00000465941 C8orf86Q6ZUL3 223 aa14.29□□□□□ -0.12
HOXA9-203ENST00000465941 RNASE11Q8TAA1 199 aaKnown RBP14.29□□□□□ -0.12
HOXA9-203ENST00000465941 PRR13Q9NZ81 148 aa14.29□□□□□ -0.12
HOXA9-203ENST00000465941 TRBV9A0A0B4J1U6 114 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 A0A0B4J2A0 478 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 A0A0G2JLM5 398 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 A0A0G2JRQ6 117 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 RBMXL2O75526 392 aaKnown RBP14.28□□□□□ -0.12
HOXA9-203ENST00000465941 HSPE1P61604 102 aaKnown RBP14.28□□□□□ -0.12
HOXA9-203ENST00000465941 KLK9Q2XQG4 91 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 Q6ZRM9 215 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 SLC35G3Q8N808 338 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 LRTM2Q8N967 370 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 OR10W1Q8NGF6 305 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 ALX4Q9H161 411 aaPredicted RBP14.28□□□□□ -0.12
HOXA9-203ENST00000465941 GNB4Q9HAV0 340 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 SHPKQ9UHJ6 478 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 KLK9Q9UKQ9 250 aa14.28□□□□□ -0.12
HOXA9-203ENST00000465941 I3L521 148 aa14.27□□□□□ -0.13
HOXA9-203ENST00000465941 DHFRP00374 187 aa14.27□□□□□ -0.13
HOXA9-203ENST00000465941 OR4E1P0C645 316 aa14.27□□□□□ -0.13
HOXA9-203ENST00000465941 ANKRD55Q3KP44 614 aa14.27□□□□□ -0.13
HOXA9-203ENST00000465941 AARDQ4LEZ3 155 aa14.27□□□□□ -0.13
HOXA9-203ENST00000465941 LYZL2Q7Z4W2 148 aa14.27□□□□□ -0.13
HOXA9-203ENST00000465941 GPR146Q96CH1 333 aa14.27□□□□□ -0.13
HOXA9-203ENST00000465941 USMG5Q96IX5 58 aa14.27□□□□□ -0.13
HOXA9-203ENST00000465941 HINT2Q9BX68 163 aa14.27□□□□□ -0.13
HOXA9-203ENST00000465941 C20orf85Q9H1P6 137 aa14.27□□□□□ -0.13
HOXA9-203ENST00000465941 FAM240BA0A1B0GVZ2 78 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 DUXBA0A1W2PPF3 345 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 C9orf170A2RU37 121 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 FAM223BA6NKX1 122 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 PRH1P02810 166 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 ANXA7P20073 488 aaKnown RBP14.26□□□□□ -0.13
HOXA9-203ENST00000465941 MYCNOSP40205 109 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 RAB25P57735 213 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 PRCDQ00LT1 54 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 WT1-ASQ06250 92 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 NMSQ5H8A3 153 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 ETV3LQ6ZN32 361 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 FAM223AQ8IWN6 122 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 NECAP1Q8NC96 275 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 RAX2Q96IS3 184 aa14.26□□□□□ -0.13
HOXA9-203ENST00000465941 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.26□□□□□ -0.13
HOXA9-203ENST00000465941 C13orf42A0A1B0GVH6 325 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 CCL24O00175 119 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 ST8SIA3O43173 380 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 REG1AP05451 166 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 OR13C7P0DN81 318 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 DEFA4P12838 97 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 RHOGP84095 191 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 DHRS2Q13268 280 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 LYG2Q86SG7 212 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 MRPL41Q8IXM3 137 aaKnown RBP14.25□□□□□ -0.13
HOXA9-203ENST00000465941 OR52E5Q8NH55 327 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 FANCD2OSQ96PS1 177 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 OR5B12Q96R08 314 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 P2RX4Q99571 388 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 NUDT15Q9NV35 164 aa14.25□□□□□ -0.13
HOXA9-203ENST00000465941 HLA-AP01891 365 aaKnown RBP14.24□□□□□ -0.13
HOXA9-203ENST00000465941 PF4P02776 101 aa14.24□□□□□ -0.13
HOXA9-203ENST00000465941 LGALS1P09382 135 aaKnown RBP14.24□□□□□ -0.13
HOXA9-203ENST00000465941 HIST1H1BP16401 226 aaKnown RBP14.24□□□□□ -0.13
HOXA9-203ENST00000465941 MECP2P51608 486 aaKnown RBP14.24□□□□□ -0.13
HOXA9-203ENST00000465941 C4orf46Q504U0 113 aa14.24□□□□□ -0.13
HOXA9-203ENST00000465941 PDLIM3Q53GG5 364 aaPredicted RBP14.24□□□□□ -0.13
HOXA9-203ENST00000465941 WFDC9Q8NEX5 89 aa14.24□□□□□ -0.13
HOXA9-203ENST00000465941 PDCD10Q9BUL8 212 aa14.24□□□□□ -0.13
HOXA9-203ENST00000465941 CACNG5Q9UF02 275 aa14.24□□□□□ -0.13
HOXA9-203ENST00000465941 CACFD1Q9UGQ2 172 aa14.24□□□□□ -0.13
HOXA9-203ENST00000465941 IGLV11-55A0A075B6I3 123 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 TRAV6A0A075B6T7 132 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 INS-IGF2F8WCM5 200 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 DUS4LO95620 317 aaKnown RBP14.23□□□□□ -0.13
HOXA9-203ENST00000465941 IFNA17P01571 189 aa14.23□□□□□ -0.13
HOXA9-203ENST00000465941 IGHV3-11P01762 117 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms