RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 PFN3P60673 137 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 TMEM258P61165 79 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 RPL15P61313 204 aaKnown RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 HERVK_113P61574 105 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ERVK-16P61578 105 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 SNRPGP62308 76 aaKnown RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 RPS4XP62701 263 aaKnown RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 RPL23P62829 140 aaKnown RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 CACNG7P62955 275 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 UBE2L3P68036 154 aaKnown RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 CX3CL1P78423 397 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 CCL20P78556 96 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 CYCSP99999 105 aaKnown RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 SLC25A11Q02978 314 aaKnown RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 POU3F1Q03052 451 aaPredicted RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 CFHR1Q03591 330 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 LAMTOR4Q0VGL1 99 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 TCF15Q12870 199 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 FOXF1Q12946 379 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 FOXC1Q12948 553 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 FHL3Q13643 280 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 FAM53BQ14153 422 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 CDSNQ15517 529 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 TESK1Q15569 626 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 TRIP6Q15654 476 aaKnown RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF141Q15928 474 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF56Q15929 161 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 LY6KQ17RY6 165 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 Q499Y3 187 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 PHLDA2Q53GA4 152 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 PRR30Q53SZ7 412 aaPredicted RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 FAM78AQ5JUQ0 283 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF678Q5SXM1 525 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 S100A7L2Q5SY68 101 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 FAM182BQ5T319 152 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 SERTAD4-AS1Q5TG53 156 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 STPG1Q5TH74 334 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 TEX36Q5VZQ5 186 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 Q5XG85 94 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 HLA-DQA1Q5Y7H0 255 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 EEF1DP3Q658K8 133 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 FAM90A2PQ658T7 463 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 PMS2CLQ68D20 193 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF324BQ6AW86 544 aaPredicted RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 LCN10Q6JVE6 187 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 TRNP1Q6NT89 227 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 NOXRED1Q6NXP6 359 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 CDC42EP5Q6NZY7 148 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 Q6Q795 121 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 C19orf48Q6RUI8 117 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF322Q6U7Q0 402 aaPredicted RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 SFTA2Q6UW10 78 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 PARM1Q6UWI2 310 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 AMTNQ6UX39 209 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF493Q6ZR52 646 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 PRSS41Q7RTY9 318 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 C6orf201Q7Z4U5 140 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ATP5L2Q7Z4Y8 100 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 SPATA12Q7Z6I5 190 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 PNPLA5Q7Z6Z6 429 aaPredicted RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ANKRD37Q7Z713 158 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 SLC25A42Q86VD7 318 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 FAM90A1Q86YD7 464 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF584Q8IVC4 421 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 APRG1Q8IVJ8 170 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 MMD2Q8IY49 270 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 PIANPQ8IYJ0 282 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 SLC22A18ASQ8N1D0 253 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 PAQR4Q8N4S7 273 aaPredicted RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 CLDN19Q8N6F1 224 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 LRTM2Q8N967 370 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 Q8N976 141 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZIC4Q8N9L1 334 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 DCAF4L2Q8NA75 395 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 C15orf53Q8NAA6 179 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 SUMF1Q8NBK3 374 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 OR11H6Q8NGC7 330 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 OR4X2Q8NGF9 303 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNRF2Q8NHG8 242 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 CLDND2Q8NHS1 167 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 OTOSQ8NHW6 89 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF563Q8TA94 476 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 C18orf32Q8TCD1 76 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 RPS4Y2Q8TD47 263 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 RNF128Q8TEB7 428 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 ZNF721Q8TF20 911 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 TSKUQ8WUA8 353 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 LRRC29Q8WV35 223 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 PPDPFLQ8WWR9 84 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 BADQ92934 168 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 DLX4Q92988 240 aaPredicted RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 MAL2Q969L2 176 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 UBE2E3Q969T4 207 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 MRPL24Q96A35 216 aaKnown RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 NABP1Q96AH0 204 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 SLC25A38Q96DW6 304 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 NEURL3Q96EH8 262 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 SLC25A44Q96H78 314 aaPredicted RBP0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 C1orf159Q96HA4 380 aa0.75□□□□□ -2.29
RPL39P28-201ENST00000465655 KAZALD1Q96I82 304 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms