RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 ANKRD34BA5PLL1 514 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 CGB1A6NKQ9 187 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 PRH1P02810 166 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 SERPINE2P07093 398 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 TRAPPC2P0DI81 140 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 TRAPPC2BP0DI82 140 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 MYOD1P15172 320 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 AREGP15514 252 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 CTRB1P17538 263 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 ZNF45Q02386 682 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 SURF2Q15527 256 aaPredicted RBP10.03□□□□□ -0.8
COL28A1-206ENST00000465339 KLK9Q2XQG4 91 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 CTRB2Q6GPI1 263 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 ZNF429Q86V71 674 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 OR1L8Q8NGR8 309 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 MARCH1Q8TCQ1 289 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 MRAPQ8TCY5 172 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 PRRT1Q99946 306 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 QTRT1Q9BXR0 403 aaKnown RBP10.03□□□□□ -0.8
COL28A1-206ENST00000465339 NDUFA13Q9P0J0 144 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 COPZ2Q9P299 210 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 KLK9Q9UKQ9 250 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 PRNDQ9UKY0 176 aa10.03□□□□□ -0.8
COL28A1-206ENST00000465339 C3orf85A0A1B0GTC6 90 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 H0Y980 276 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 RBMXL2O75526 392 aaKnown RBP10.02□□□□□ -0.81
COL28A1-206ENST00000465339 B3GALNT1O75752 331 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 OR2J3O76001 311 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 ATG12O94817 140 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 CTSDP07339 412 aaPredicted RBP10.02□□□□□ -0.81
COL28A1-206ENST00000465339 DEFA4P12838 97 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 PI3P19957 117 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 PPP5CP53041 499 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 TATDN3Q17R31 274 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 ACSM6Q6P461 480 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 H2BFWTQ7Z2G1 175 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 OR4C16Q8NGL9 310 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 OR13C8Q8NGS7 320 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 SEC22AQ96IW7 307 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 THAP7Q9BT49 309 aaPredicted RBP10.02□□□□□ -0.81
COL28A1-206ENST00000465339 FBXL7Q9UJT9 491 aa10.02□□□□□ -0.81
COL28A1-206ENST00000465339 C14orf166Q9Y224 244 aaKnown RBP10.02□□□□□ -0.81
COL28A1-206ENST00000465339 IGLC7A0M8Q6 106 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 CYB5BO43169 146 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 DEFA5Q01523 94 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 EXOSC2Q13868 293 aaKnown RBP10.01□□□□□ -0.81
COL28A1-206ENST00000465339 KLF5Q13887 457 aaPredicted RBP10.01□□□□□ -0.81
COL28A1-206ENST00000465339 C15orf32Q32M92 178 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 PYDC2Q56P42 97 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 FAAP20Q6NZ36 180 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 OR5B3Q8NH48 314 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 MRGPRFQ96AM1 343 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 SCGB3A2Q96PL1 93 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 FANCD2OSQ96PS1 177 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 OR4C12Q96R67 309 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 ELOVL1Q9BW60 279 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 NDUFA4L2Q9NRX3 87 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 TMEM14BQ9NUH8 114 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 SLC2A8Q9NY64 477 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 THYN1Q9P016 225 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 SCP2D1Q9UJQ7 156 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 OR51B2Q9Y5P1 312 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 SORL1Q92673 2214 aa10.01□□□□□ -0.81
COL28A1-206ENST00000465339 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10□□□□□ -0.81
COL28A1-206ENST00000465339 K7EIL1 84 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 SAP30O75446 220 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 IGKV1-39P01597 117 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 IGKV1D-39P04432 117 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 OR13C7P0DN81 318 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 DCTN2Q13561 401 aaKnown RBP10□□□□□ -0.81
COL28A1-206ENST00000465339 TM4SF20Q53R12 229 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 CCDC190Q86UF4 302 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 GDPD1Q8N9F7 314 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 OR10W1Q8NGF6 305 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 OR51S1Q8NGJ8 323 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 OR4A16Q8NH70 328 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 LSM10Q969L4 123 aaKnown RBP10□□□□□ -0.81
COL28A1-206ENST00000465339 TMEM56Q96MV1 263 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 TP53RKQ96S44 253 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 GPR132Q9UNW8 380 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 NSG2Q9Y328 171 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 V9GYH0 126 aa10□□□□□ -0.81
COL28A1-206ENST00000465339 IGLV11-55A0A075B6I3 123 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 WI2-2373I1.2A0A1W2PRP0 233 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 C15orf61A6NNL5 157 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 NDUFB8O95169 186 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 TRBV12-3P01733 135 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 REG1AP05451 166 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 FAUP35544 74 aaKnown RBP9.99□□□□□ -0.81
COL28A1-206ENST00000465339 ETV6P41212 452 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 AP3S2P59780 193 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 RPEL1Q2QD12 228 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 DEFB121Q5J5C9 76 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 SPANXN2Q5MJ10 180 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 Q8N402 240 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 CHAC2Q8WUX2 184 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 DEDD2Q8WXF8 326 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 EEF1AKMT3Q96AZ1 226 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 CXorf58Q96LI9 332 aa9.99□□□□□ -0.81
COL28A1-206ENST00000465339 RTBDNQ9BSG5 229 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms