RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 TBC1D24Q9ULP9 559 aa13.21□□□□□ -0.29
USP39-211ENST00000465282 TRRAPQ9Y4A5 3859 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 FAM240BA0A1B0GVZ2 78 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 RBMXL2O75526 392 aaKnown RBP13.2□□□□□ -0.3
USP39-211ENST00000465282 SFT2D2O95562 160 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 TCRBP04435 133 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 PSMB6P28072 239 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 DEFA1P59665 94 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 DEFA3P59666 94 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 HSPE1P61604 102 aaKnown RBP13.2□□□□□ -0.3
USP39-211ENST00000465282 KIAA0141Q14154 515 aaPredicted RBP13.2□□□□□ -0.3
USP39-211ENST00000465282 KLHL30-AS1Q8NEE0 82 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 C4orf3Q8WVX3 66 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 USMG5Q96IX5 58 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 ZNF355PQ9NSJ1 428 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 COA4Q9NYJ1 87 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 NSG2Q9Y328 171 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 WNK1Q9H4A3 2382 aa13.2□□□□□ -0.3
USP39-211ENST00000465282 A0A1B0GW64 132 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 A0A1W2PRX2 142 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 HMX3A6NHT5 357 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 CGB1A6NKQ9 187 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 NUDT19A8MXV4 375 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 CYB5BO43169 146 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 TRGV3P03979 118 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 APELAP0DMC3 54 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 CTRB1P17538 263 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 TPPP2P59282 170 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 RUNX1Q01196 453 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 PPP1R1AQ13522 171 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 KLK9Q2XQG4 91 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 AARDQ4LEZ3 155 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 CTRB2Q6GPI1 263 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 C20orf85Q9H1P6 137 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.19□□□□□ -0.3
USP39-211ENST00000465282 KLK9Q9UKQ9 250 aa13.19□□□□□ -0.3
USP39-211ENST00000465282 A0A0B4J293 547 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 IGLC7A0M8Q6 106 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 C9orf170A2RU37 121 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 OR4E1P0C645 316 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 MYOD1P15172 320 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 HIST1H1BP16401 226 aaKnown RBP13.18□□□□□ -0.3
USP39-211ENST00000465282 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 IFITM3Q01628 133 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 LCNL1Q6ZST4 164 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 SLC35G3Q8N808 338 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 MS4A10Q96PG2 267 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 PDCD10Q9BUL8 212 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 FLVCR2Q9UPI3 526 aa13.18□□□□□ -0.3
USP39-211ENST00000465282 TRBV9A0A0B4J1U6 114 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 FAM223BA6NKX1 122 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 DBX1A6NMT0 343 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 DUS4LO95620 317 aaKnown RBP13.17□□□□□ -0.3
USP39-211ENST00000465282 TSPAN15O95858 294 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 HLA-AP01891 365 aaKnown RBP13.17□□□□□ -0.3
USP39-211ENST00000465282 AREGP15514 252 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 MECP2P51608 486 aaKnown RBP13.17□□□□□ -0.3
USP39-211ENST00000465282 FAM209BQ5JX69 171 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 HIST2H2BDQ6DRA6 164 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 LYG2Q86SG7 212 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 FAM223AQ8IWN6 122 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 NECAP1Q8NC96 275 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 OR1L6Q8NGR2 347 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 OR52E5Q8NH55 327 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 ENKURQ8TC29 256 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 TMED3Q9Y3Q3 217 aa13.17□□□□□ -0.3
USP39-211ENST00000465282 A0A0G2JRQ6 117 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 C13orf42A0A1B0GVH6 325 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 INS-IGF2F8WCM5 200 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 I3L521 148 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 ST8SIA3O43173 380 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 IFNA17P01571 189 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 H2AFB2P0C5Z0 115 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 SULT1A3P0DMM9 295 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 SULT1A4P0DMN0 295 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 OR13C7P0DN81 318 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 SLC25A6P12236 298 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 DEFA4P12838 97 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 MYCNOSP40205 109 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 DHRS2Q13268 280 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 IZUMO4Q1ZYL8 232 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 ANKRD55Q3KP44 614 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 C4orf46Q504U0 113 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 PDLIM3Q53GG5 364 aaPredicted RBP13.16□□□□□ -0.3
USP39-211ENST00000465282 NMSQ5H8A3 153 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 TREML4Q6UXN2 200 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 C8orf86Q6ZUL3 223 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 LYZL2Q7Z4W2 148 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 DUSP18Q8NEJ0 188 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 OR10W1Q8NGF6 305 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 COQ8AQ8NI60 647 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 CASTOR1Q8WTX7 329 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 GPR146Q96CH1 333 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 HINT2Q9BX68 163 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 NUDT15Q9NV35 164 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 THYN1Q9P016 225 aa13.16□□□□□ -0.3
USP39-211ENST00000465282 A0A1B0GU03 582 aa13.15□□□□□ -0.3
USP39-211ENST00000465282 CCL24O00175 119 aa13.15□□□□□ -0.3
USP39-211ENST00000465282 PF4P02776 101 aa13.15□□□□□ -0.3
USP39-211ENST00000465282 LGALS1P09382 135 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms