RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, human

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UFM1-204	ENST00000464423	OR5AC1	P0C628	307 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	WT1-AS	Q06250	92 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	TRIM16L	Q309B1	348 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	ZNF343	Q6P1L6	599 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	SLC25A42	Q86VD7	318 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	CADM3	Q8N126	398 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	GDPD1	Q8N9F7	314 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	TMEM230	Q96A57	120 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	NAA60	Q9H7X0	242 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	NDUFA4L2	Q9NRX3	87 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	PRR13	Q9NZ81	148 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	SCP2D1	Q9UJQ7	156 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423	DMRT1	Q9Y5R6	373 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423		S4R3C0	116 aa		13.56	□□□□□ -0.24
UFM1-204	ENST00000464423		A0A0G2JRQ6	117 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	CRYM-AS1	A6NIL9	109 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	C15orf61	A6NNL5	157 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	DUS4L	O95620	317 aa	Known RBP	13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	FGF2	P09038	288 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	TRAPPC2	P0DI81	140 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	TRAPPC2B	P0DI82	140 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	UCP1	P25874	307 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	ATP5G2	Q06055	141 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	ZNF57	Q68EA5	555 aa	Predicted RBP	13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	NECAP1	Q8NC96	275 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	OR1L8	Q8NGR8	309 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	LHFPL5	Q8TAF8	219 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	USMG5	Q96IX5	58 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	TMEM14B	Q9NUH8	114 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	FBXL7	Q9UJT9	491 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	PRND	Q9UKY0	176 aa		13.55	□□□□□ -0.24
UFM1-204	ENST00000464423	LINC00854	A0A1B0GVQ3	168 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	FAM223B	A6NKX1	122 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	SEC14L6	B5MCN3	397 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	IGHV3-23	P01764	117 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423		P0C879	139 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	OR13C7	P0DN81	318 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	AP3S2	P59780	193 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	EXOSC2	Q13868	293 aa	Known RBP	13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	C15orf32	Q32M92	178 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	FAM223A	Q8IWN6	122 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	GLYATL2	Q8WU03	294 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	MCRIP2	Q9BUT9	160 aa	Known RBP	13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	TMEM222	Q9H0R3	208 aa		13.54	□□□□□ -0.24
UFM1-204	ENST00000464423	PEF1	Q9UBV8	284 aa	Known RBP	13.54	□□□□□ -0.24
UFM1-204	ENST00000464423		A0A0B4J293	547 aa		13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	DEFA4	P12838	97 aa		13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	AKR1C4	P17516	323 aa		13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	FAU	P35544	74 aa	Known RBP	13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	AKR1C2	P52895	323 aa		13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	CNPY1	Q3B7I2	92 aa		13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	SPINK9	Q5DT21	86 aa		13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	OR4A16	Q8NH70	328 aa		13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	TSC22D3	Q99576	134 aa		13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	RANGRF	Q9HD47	186 aa	Predicted RBP	13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.53	□□□□□ -0.24
UFM1-204	ENST00000464423	IGLV11-55	A0A075B6I3	123 aa		13.52	□□□□□ -0.25
UFM1-204	ENST00000464423	OVOL1	O14753	267 aa		13.52	□□□□□ -0.25
UFM1-204	ENST00000464423	CDS2	O95674	445 aa		13.52	□□□□□ -0.25
UFM1-204	ENST00000464423	MFAP2	P55001	183 aa		13.52	□□□□□ -0.25
UFM1-204	ENST00000464423	SUPT4H1	P63272	117 aa	Known RBP	13.52	□□□□□ -0.25
UFM1-204	ENST00000464423	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.52	□□□□□ -0.25
UFM1-204	ENST00000464423	SELENOH	Q8IZQ5	122 aa	Known RBP	13.52	□□□□□ -0.25
UFM1-204	ENST00000464423	LSM10	Q969L4	123 aa	Known RBP	13.52	□□□□□ -0.25
UFM1-204	ENST00000464423	SRSF8	Q9BRL6	282 aa	Known RBP	13.52	□□□□□ -0.25
UFM1-204	ENST00000464423	PPP5D1	E7EU14	171 aa		13.51	□□□□□ -0.25
UFM1-204	ENST00000464423	CCR6	P51684	374 aa		13.51	□□□□□ -0.25
UFM1-204	ENST00000464423	EGFEM1P	Q0D2K5	195 aa		13.51	□□□□□ -0.25
UFM1-204	ENST00000464423	KLK9	Q2XQG4	91 aa		13.51	□□□□□ -0.25
UFM1-204	ENST00000464423	TRIQK	Q629K1	86 aa		13.51	□□□□□ -0.25
UFM1-204	ENST00000464423		Q6ZRM9	215 aa		13.51	□□□□□ -0.25
UFM1-204	ENST00000464423	TMED4	Q7Z7H5	227 aa		13.51	□□□□□ -0.25
UFM1-204	ENST00000464423	OR5B3	Q8NH48	314 aa		13.51	□□□□□ -0.25
UFM1-204	ENST00000464423	FKBP11	Q9NYL4	201 aa		13.51	□□□□□ -0.25
UFM1-204	ENST00000464423	KLK9	Q9UKQ9	250 aa		13.51	□□□□□ -0.25
UFM1-204	ENST00000464423	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	MFSD2B	A6NFX1	497 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	BMPR1B	O00238	502 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	B3GALNT1	O75752	331 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	DHFR	P00374	187 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	HLA-A	P01891	365 aa	Known RBP	13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	IL7	P13232	177 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	MECP2	P51608	486 aa	Known RBP	13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	DHODH	Q02127	395 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	TMEM187	Q14656	261 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	C9orf66	Q5T8R8	295 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	TMEM268	Q5VZI3	342 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	SGPP2	Q8IWX5	399 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	CCDC140	Q96MF4	163 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	SCGB3A2	Q96PL1	93 aa		13.5	□□□□□ -0.25
UFM1-204	ENST00000464423	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.49	□□□□□ -0.25
UFM1-204	ENST00000464423	ST8SIA3	O43173	380 aa		13.49	□□□□□ -0.25
UFM1-204	ENST00000464423	HIST1H1B	P16401	226 aa	Known RBP	13.49	□□□□□ -0.25
UFM1-204	ENST00000464423	INPP1	P49441	399 aa		13.49	□□□□□ -0.25
UFM1-204	ENST00000464423	SYNJ2BP	P57105	145 aa		13.49	□□□□□ -0.25
UFM1-204	ENST00000464423	HSPE1	P61604	102 aa	Known RBP	13.49	□□□□□ -0.25
UFM1-204	ENST00000464423	PRCD	Q00LT1	54 aa		13.49	□□□□□ -0.25
UFM1-204	ENST00000464423	KLF5	Q13887	457 aa	Predicted RBP	13.49	□□□□□ -0.25
UFM1-204	ENST00000464423	THOC7	Q6I9Y2	204 aa	Known RBP	13.49	□□□□□ -0.25
UFM1-204	ENST00000464423	SLC25A24	Q6NUK1	477 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms