RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 CGB1A6NKQ9 187 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 RBMXL2O75526 392 aaKnown RBP9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 TRGV3P03979 118 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 TRAPPC2P0DI81 140 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 TRAPPC2BP0DI82 140 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 MYOD1P15172 320 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 VAMP1P23763 118 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 TPPP2P59282 170 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 MZT2BQ6NZ67 158 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 TREML4Q6UXN2 200 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 MRPL41Q8IXM3 137 aaKnown RBP9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 SELENOHQ8IZQ5 122 aaKnown RBP9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 LGI3Q8N145 548 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 ZNF491Q8N8L2 437 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 LHFPL5Q8TAF8 219 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 C4orf3Q8WVX3 66 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 LSM10Q969L4 123 aaKnown RBP9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 NDUFA4L2Q9NRX3 87 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 SHPKQ9UHJ6 478 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 NSG2Q9Y328 171 aa9.08□□□□□ -0.96
TRAF3IP1-204ENST00000462122 DUXBA0A1W2PPF3 345 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 SFT2D2O95562 160 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 PF4P02776 101 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 CRYGCP07315 174 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 CTRB1P17538 263 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 PSMB6P28072 239 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 RAB25P57735 213 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 RUNX1Q01196 453 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 PPP1R1AQ13522 171 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 KIAA0141Q14154 515 aaPredicted RBP9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 CTRB2Q6GPI1 263 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 SLC35G3Q8N808 338 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 LRTM2Q8N967 370 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 CASTOR1Q8WTX7 329 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 USMG5Q96IX5 58 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 MS4A10Q96PG2 267 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 PDCD10Q9BUL8 212 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 C20orf85Q9H1P6 137 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 TBC1D24Q9ULP9 559 aa9.07□□□□□ -0.96
TRAF3IP1-204ENST00000462122 MGAM2Q2M2H8 2515 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 TRBV9A0A0B4J1U6 114 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 A0A0B4J293 547 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 FAM240BA0A1B0GVZ2 78 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 IGLC7A0M8Q6 106 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 FAM223BA6NKX1 122 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 DBX1A6NMT0 343 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 CYB5BO43169 146 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 HLA-AP01891 365 aaKnown RBP9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 TCRBP04435 133 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 DEFA4P12838 97 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 AREGP15514 252 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 HIST1H1BP16401 226 aaKnown RBP9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 DEFA1P59665 94 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 DEFA3P59666 94 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 HSPE1P61604 102 aaKnown RBP9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 PRCDQ00LT1 54 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 C18orf65Q6ZTR6 163 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 FAM223AQ8IWN6 122 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 HINT2Q9BX68 163 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 ALX4Q9H161 411 aaPredicted RBP9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 GNB4Q9HAV0 340 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 CACFD1Q9UGQ2 172 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 FLVCR2Q9UPI3 526 aa9.06□□□□□ -0.96
TRAF3IP1-204ENST00000462122 A0A0G2JRQ6 117 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 C13orf42A0A1B0GVH6 325 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 C9orf170A2RU37 121 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 I3L521 148 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 LGALS1P09382 135 aaKnown RBP9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 OR4E1P0C645 316 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 OR13C7P0DN81 318 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 MYCNOSP40205 109 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 MECP2P51608 486 aaKnown RBP9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 WT1-ASQ06250 92 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 IZUMO4Q1ZYL8 232 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 KLK9Q2XQG4 91 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 AARDQ4LEZ3 155 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 C4orf46Q504U0 113 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 NMSQ5H8A3 153 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 NECAP1Q8NC96 275 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 OR10W1Q8NGF6 305 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 OR52E5Q8NH55 327 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 PLEKHA3Q9HB20 300 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 NUDT15Q9NV35 164 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 PRR13Q9NZ81 148 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 THYN1Q9P016 225 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 CACNG5Q9UF02 275 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 KLK9Q9UKQ9 250 aa9.05□□□□□ -0.96
TRAF3IP1-204ENST00000462122 INS-IGF2F8WCM5 200 aa9.04□□□□□ -0.96
TRAF3IP1-204ENST00000462122 CCL24O00175 119 aa9.04□□□□□ -0.96
TRAF3IP1-204ENST00000462122 ST8SIA3O43173 380 aa9.04□□□□□ -0.96
TRAF3IP1-204ENST00000462122 DUS4LO95620 317 aaKnown RBP9.04□□□□□ -0.96
TRAF3IP1-204ENST00000462122 IFNA17P01571 189 aa9.04□□□□□ -0.96
TRAF3IP1-204ENST00000462122 PRH1P02810 166 aa9.04□□□□□ -0.96
TRAF3IP1-204ENST00000462122 REG1AP05451 166 aa9.04□□□□□ -0.96
TRAF3IP1-204ENST00000462122 SULT1A3P0DMM9 295 aa9.04□□□□□ -0.96
TRAF3IP1-204ENST00000462122 SULT1A4P0DMN0 295 aa9.04□□□□□ -0.96
TRAF3IP1-204ENST00000462122 ANXA7P20073 488 aaKnown RBP9.04□□□□□ -0.96
TRAF3IP1-204ENST00000462122 RHOGP84095 191 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms