RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CTRB1P17538 263 aa12.47□□□□□ -0.41
CD28-203ENST00000458610 INPP1P49441 399 aa12.47□□□□□ -0.41
CD28-203ENST00000458610 DHODHQ02127 395 aa12.47□□□□□ -0.41
CD28-203ENST00000458610 TRIM16LQ309B1 348 aa12.47□□□□□ -0.41
CD28-203ENST00000458610 PDLIM3Q53GG5 364 aaPredicted RBP12.47□□□□□ -0.41
CD28-203ENST00000458610 CTRB2Q6GPI1 263 aa12.47□□□□□ -0.41
CD28-203ENST00000458610 FAAP20Q6NZ36 180 aa12.47□□□□□ -0.41
CD28-203ENST00000458610 GDPD1Q8N9F7 314 aa12.47□□□□□ -0.41
CD28-203ENST00000458610 ELOVL1Q9BW60 279 aa12.47□□□□□ -0.41
CD28-203ENST00000458610 FBXL7Q9UJT9 491 aa12.47□□□□□ -0.41
CD28-203ENST00000458610 ANKRD34BA5PLL1 514 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 WIPF1O43516 503 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 RBMXL2O75526 392 aaKnown RBP12.46□□□□□ -0.41
CD28-203ENST00000458610 PRH1P02810 166 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 AREGP15514 252 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 EGFEM1PQ0D2K5 195 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 KLK9Q2XQG4 91 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 ZNF429Q86V71 674 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 SGPP2Q8IWX5 399 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 OR1L6Q8NGR2 347 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 DLX4Q92988 240 aaPredicted RBP12.46□□□□□ -0.41
CD28-203ENST00000458610 LSM10Q969L4 123 aaKnown RBP12.46□□□□□ -0.41
CD28-203ENST00000458610 RRNAD1Q96FB5 475 aaKnown RBP12.46□□□□□ -0.41
CD28-203ENST00000458610 TP53RKQ96S44 253 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 RTBDNQ9BSG5 229 aaPredicted RBP12.46□□□□□ -0.41
CD28-203ENST00000458610 HINT2Q9BX68 163 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 NDUFA4L2Q9NRX3 87 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 KLK9Q9UKQ9 250 aa12.46□□□□□ -0.41
CD28-203ENST00000458610 PIGBOS1A0A0B4J2F0 54 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 A0A1B0GW64 132 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 C15orf61A6NNL5 157 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 OR2J3O76001 311 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 OR13C7P0DN81 318 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 MYOD1P15172 320 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 UCP1P25874 307 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 HOXD3P31249 432 aaPredicted RBP12.45□□□□□ -0.42
CD28-203ENST00000458610 MECP2P51608 486 aaKnown RBP12.45□□□□□ -0.42
CD28-203ENST00000458610 AKR1C2P52895 323 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 SLURP1P55000 103 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 ZNF45Q02386 682 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 EXOSC2Q13868 293 aaKnown RBP12.45□□□□□ -0.42
CD28-203ENST00000458610 KLF9Q13886 244 aaPredicted RBP12.45□□□□□ -0.42
CD28-203ENST00000458610 ZNF79Q15937 498 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 C15orf32Q32M92 178 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 RNASE11Q8TAA1 199 aaKnown RBP12.45□□□□□ -0.42
CD28-203ENST00000458610 MRGPRFQ96AM1 343 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 CXorf58Q96LI9 332 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 OR4C12Q96R67 309 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 C5orf66Q9H5L9 145 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 NAA60Q9H7X0 242 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 TMEM14BQ9NUH8 114 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 NSG2Q9Y328 171 aa12.45□□□□□ -0.42
CD28-203ENST00000458610 IGLC7A0M8Q6 106 aa12.44□□□□□ -0.42
CD28-203ENST00000458610 CGB1A6NKQ9 187 aa12.44□□□□□ -0.42
CD28-203ENST00000458610 IGKV1-39P01597 117 aa12.44□□□□□ -0.42
CD28-203ENST00000458610 IGKV1D-39P04432 117 aa12.44□□□□□ -0.42
CD28-203ENST00000458610 HSPE1P61604 102 aaKnown RBP12.44□□□□□ -0.42
CD28-203ENST00000458610 SP6Q3SY56 376 aa12.44□□□□□ -0.42
CD28-203ENST00000458610 ZNF57Q68EA5 555 aaPredicted RBP12.44□□□□□ -0.42
CD28-203ENST00000458610 FAM219AQ8IW50 185 aa12.44□□□□□ -0.42
CD28-203ENST00000458610 TRIM63Q969Q1 353 aa12.44□□□□□ -0.42
CD28-203ENST00000458610 EEF1AKMT3Q96AZ1 226 aa12.44□□□□□ -0.42
CD28-203ENST00000458610 SLC25A21Q9BQT8 299 aaPredicted RBP12.44□□□□□ -0.42
CD28-203ENST00000458610 PDCD10Q9BUL8 212 aa12.44□□□□□ -0.42
CD28-203ENST00000458610 TMEM222Q9H0R3 208 aa12.44□□□□□ -0.42
CD28-203ENST00000458610 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.43□□□□□ -0.42
CD28-203ENST00000458610 CDS2O95674 445 aa12.43□□□□□ -0.42
CD28-203ENST00000458610 REG1AP05451 166 aa12.43□□□□□ -0.42
CD28-203ENST00000458610 ANXA3P12429 323 aa12.43□□□□□ -0.42
CD28-203ENST00000458610 DCTN2Q13561 401 aaKnown RBP12.43□□□□□ -0.42
CD28-203ENST00000458610 RPEL1Q2QD12 228 aa12.43□□□□□ -0.42
CD28-203ENST00000458610 TRIQKQ629K1 86 aa12.43□□□□□ -0.42
CD28-203ENST00000458610 FANCD2OSQ96PS1 177 aa12.43□□□□□ -0.42
CD28-203ENST00000458610 SRRQ9GZT4 340 aa12.43□□□□□ -0.42
CD28-203ENST00000458610 IGLV11-55A0A075B6I3 123 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 TRBV7-1A0A0A6YYK4 115 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 NAP1L6A6NFF2 107 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 CRYM-AS1A6NIL9 109 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 SAP30O75446 220 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 OR5AC1P0C628 307 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 ERHP84090 104 aaKnown RBP12.42□□□□□ -0.42
CD28-203ENST00000458610 KLF5Q13887 457 aaPredicted RBP12.42□□□□□ -0.42
CD28-203ENST00000458610 SLC25A24Q6NUK1 477 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 ACSM6Q6P461 480 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 OR10W1Q8NGF6 305 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 GLYATL2Q8WU03 294 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
CD28-203ENST00000458610 CACFD1Q9UGQ2 172 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 NOTCH1P46531 2555 aa12.42□□□□□ -0.42
CD28-203ENST00000458610 CENPXA8MT69 81 aa12.41□□□□□ -0.42
CD28-203ENST00000458610 GGCTO75223 188 aaKnown RBP12.41□□□□□ -0.42
CD28-203ENST00000458610 NDUFB8O95169 186 aa12.41□□□□□ -0.42
CD28-203ENST00000458610 SRPXP78539 464 aa12.41□□□□□ -0.42
CD28-203ENST00000458610 PRCDQ00LT1 54 aa12.41□□□□□ -0.42
CD28-203ENST00000458610 DEFA5Q01523 94 aa12.41□□□□□ -0.42
CD28-203ENST00000458610 WT1-ASQ06250 92 aa12.41□□□□□ -0.42
CD28-203ENST00000458610 MRAPQ8TCY5 172 aa12.41□□□□□ -0.42
CD28-203ENST00000458610 VN1R17PQ8TDU5 208 aa12.41□□□□□ -0.42
CD28-203ENST00000458610 RBPMSQ93062 196 aaKnown RBP12.41□□□□□ -0.42
CD28-203ENST00000458610 IL22RA2Q969J5 263 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms