RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 RUNX1Q01196 453 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 WT1-ASQ06250 92 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 FHL3Q13643 280 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 TMEM187Q14656 261 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 SPINK9Q5DT21 86 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 CTRB2Q6GPI1 263 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 Q6ZRM9 215 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 CADM3Q8N126 398 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 FANCD2OSQ96PS1 177 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 HINT2Q9BX68 163 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 QTRT1Q9BXR0 403 aaKnown RBP9.43□□□□□ -0.9
CNOT3-205ENST00000457463 BATF3Q9NR55 127 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 NDUFA4L2Q9NRX3 87 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 TMEM14BQ9NUH8 114 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 S4R3C0 116 aa9.43□□□□□ -0.9
CNOT3-205ENST00000457463 TRBV9A0A0B4J1U6 114 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 NPIPB5A8MRT5 1133 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 NDUFB8O95169 186 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 BRI3O95415 125 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 TRAPPC2P0DI81 140 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 TRAPPC2BP0DI82 140 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 SLC6A1P30531 599 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 AKR1C2P52895 323 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 SLURP1P55000 103 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 RHOGP84095 191 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 SAMD5Q5TGI4 173 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 TMEM268Q5VZI3 342 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 SGPP2Q8IWX5 399 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 OR1L8Q8NGR8 309 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 SCGB3A2Q96PL1 93 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 ZNF257Q9Y2Q1 563 aa9.42□□□□□ -0.9
CNOT3-205ENST00000457463 C13orf42A0A1B0GVH6 325 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 ANKRD34BA5PLL1 514 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 IGHV3-23P01764 117 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 OR13C7P0DN81 318 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 MFAP2P55001 183 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 DHODHQ02127 395 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 LINC00299Q6ZSB3 139 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 OR4A16Q8NH70 328 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 DEDD2Q8WXF8 326 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 GPR146Q96CH1 333 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 GALNT14Q96FL9 552 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 TMEM56Q96MV1 263 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 TSC22D3Q99576 134 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 SLC25A21Q9BQT8 299 aaPredicted RBP9.41□□□□□ -0.9
CNOT3-205ENST00000457463 PRNDQ9UKY0 176 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 TMEM56-RWDD3S4R434 201 aa9.41□□□□□ -0.9
CNOT3-205ENST00000457463 MEGF8Q7Z7M0 2845 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 IGLV11-55A0A075B6I3 123 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 NAP1L6A6NFF2 107 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 ST8SIA3O43173 380 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 NDUFB6O95139 128 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 PRB2P02812 416 aaPredicted RBP9.4□□□□□ -0.9
CNOT3-205ENST00000457463 FGF2P09038 288 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 IFITM3Q01628 133 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 ZNF616Q08AN1 781 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 PPP1R1AQ13522 171 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 RBMS2Q15434 407 aaKnown RBP9.4□□□□□ -0.9
CNOT3-205ENST00000457463 BEAN1Q3B7T3 259 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 ANKRD55Q3KP44 614 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 ZNF343Q6P1L6 599 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 LYZL2Q7Z4W2 148 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 SLC35G3Q8N808 338 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 DCUN1D4Q92564 292 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 DLX4Q92988 240 aaPredicted RBP9.4□□□□□ -0.9
CNOT3-205ENST00000457463 RBPMSQ93062 196 aaKnown RBP9.4□□□□□ -0.9
CNOT3-205ENST00000457463 FBXL7Q9UJT9 491 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 KCNIP3Q9Y2W7 256 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 NOTCH3Q9UM47 2321 aa9.4□□□□□ -0.9
CNOT3-205ENST00000457463 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 IGHV3-21A0A0B4J1V1 117 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 A0A0G2JLM5 398 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 MFSD2BA6NFX1 497 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 LINC01619G3V211 115 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 LYRM1O43325 122 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 B3GALNT1O75752 331 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 NXPH3O95157 252 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 HSPB1P04792 205 aaKnown RBP9.39□□□□□ -0.91
CNOT3-205ENST00000457463 DEFA4P12838 97 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 HSPE1P61604 102 aaKnown RBP9.39□□□□□ -0.91
CNOT3-205ENST00000457463 PRCDQ00LT1 54 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 ATP5G2Q06055 141 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 EXOSC2Q13868 293 aaKnown RBP9.39□□□□□ -0.91
CNOT3-205ENST00000457463 KLK9Q2XQG4 91 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 C15orf32Q32M92 178 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 C11orf87Q6NUJ2 197 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 SLC25A42Q86VD7 318 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 OR5B3Q8NH48 314 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 RNASE11Q8TAA1 199 aaKnown RBP9.39□□□□□ -0.91
CNOT3-205ENST00000457463 DPF1Q92782 380 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 LSM10Q969L4 123 aaKnown RBP9.39□□□□□ -0.91
CNOT3-205ENST00000457463 RRNAD1Q96FB5 475 aaKnown RBP9.39□□□□□ -0.91
CNOT3-205ENST00000457463 USMG5Q96IX5 58 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 CCDC32Q9BV29 185 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 FKBP11Q9NYL4 201 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 CACNG5Q9UF02 275 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 KLK9Q9UKQ9 250 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 TBC1D24Q9ULP9 559 aa9.39□□□□□ -0.91
CNOT3-205ENST00000457463 PRKDCP78527 4128 aaKnown RBP9.39□□□□□ -0.91
CNOT3-205ENST00000457463 FAM223BA6NKX1 122 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms