RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TMED4Q7Z7H5 227 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 OR1L8Q8NGR8 309 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 FAM110DQ8TAY7 271 aaPredicted RBP7.81□□□□□ -1.16
ATG4A-206ENST00000457035 UBE2E2Q96LR5 201 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 MS4A10Q96PG2 267 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 FYTTD1Q96QD9 318 aaKnown RBP7.81□□□□□ -1.16
ATG4A-206ENST00000457035 TSC22D3Q99576 134 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 PHB2Q99623 299 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 COMMD5Q9GZQ3 224 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 NDUFA4L2Q9NRX3 87 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 TMEM14BQ9NUH8 114 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 FKBP11Q9NYL4 201 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 TBC1D24Q9ULP9 559 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 FLVCR2Q9UPI3 526 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 OR51B2Q9Y5P1 312 aa7.81□□□□□ -1.16
ATG4A-206ENST00000457035 SORL1Q92673 2214 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 TRBV9A0A0B4J1U6 114 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 A0A0G2JRQ6 117 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 IGLC7A0M8Q6 106 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 C15orf61A6NNL5 157 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 I3L521 148 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 RBMXL2O75526 392 aaKnown RBP7.8□□□□□ -1.16
ATG4A-206ENST00000457035 ATG12O94817 140 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 AREGP15514 252 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 CTRB1P17538 263 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 SLC6A1P30531 599 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 KLK9Q2XQG4 91 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 PDLIM3Q53GG5 364 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-206ENST00000457035 CTRB2Q6GPI1 263 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 ZNF695Q8IW36 515 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 CENPSQ8N2Z9 138 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 OR4F17Q8NGA8 305 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 OR10W1Q8NGF6 305 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 OR4A16Q8NH70 328 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 RBPMSQ93062 196 aaKnown RBP7.8□□□□□ -1.16
ATG4A-206ENST00000457035 IL22RA2Q969J5 263 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 OR4F4Q96R69 305 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 SRSF8Q9BRL6 282 aaKnown RBP7.8□□□□□ -1.16
ATG4A-206ENST00000457035 QTRT1Q9BXR0 403 aaKnown RBP7.8□□□□□ -1.16
ATG4A-206ENST00000457035 SLA2Q9H6Q3 261 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 GNB4Q9HAV0 340 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 PRR13Q9NZ81 148 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 KLK9Q9UKQ9 250 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 PRNDQ9UKY0 176 aa7.8□□□□□ -1.16
ATG4A-206ENST00000457035 NPIPB5A8MRT5 1133 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 SFT2D2O95562 160 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 PRH1P02810 166 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 TRGV3P03979 118 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 TCRBP04435 133 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 TRAPPC2P0DI81 140 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 TRAPPC2BP0DI82 140 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 PSMB6P28072 239 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 AKR1C2P52895 323 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 UBE2MP61081 183 aaKnown RBP7.79□□□□□ -1.16
ATG4A-206ENST00000457035 HSPE1P61604 102 aaKnown RBP7.79□□□□□ -1.16
ATG4A-206ENST00000457035 RUNX1Q01196 453 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 WT1-ASQ06250 92 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 ASAH1Q13510 395 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 PPP1R1AQ13522 171 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 ANKRD55Q3KP44 614 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 TMEM268Q5VZI3 342 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 ETV3LQ6ZN32 361 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 C19orf35Q6ZS72 473 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 ZNF429Q86V71 674 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 FAM219AQ8IW50 185 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 LRTM2Q8N967 370 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 KLHL30-AS1Q8NEE0 82 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 OR5B3Q8NH48 314 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 C4orf3Q8WVX3 66 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 LSM10Q969L4 123 aaKnown RBP7.79□□□□□ -1.16
ATG4A-206ENST00000457035 GPR146Q96CH1 333 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 RRNAD1Q96FB5 475 aaKnown RBP7.79□□□□□ -1.16
ATG4A-206ENST00000457035 RAX2Q96IS3 184 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 FANCD2OSQ96PS1 177 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 ZNF355PQ9NSJ1 428 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 COA4Q9NYJ1 87 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 ZNF257Q9Y2Q1 563 aa7.79□□□□□ -1.16
ATG4A-206ENST00000457035 DNAH3Q8TD57 4116 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 A0A0B4J2A0 478 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 LOC100996750A0A140TA64 210 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 NUDT19A8MXV4 375 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 ANXA3P12429 323 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 MYCNOSP40205 109 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 TPPP2P59282 170 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 AARDQ4LEZ3 155 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 THOC7Q6I9Y2 204 aaKnown RBP7.78□□□□□ -1.16
ATG4A-206ENST00000457035 LYZL2Q7Z4W2 148 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 LGI3Q8N145 548 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 SLC35G3Q8N808 338 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 WFDC9Q8NEX5 89 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 P2RX4Q99571 388 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 KRTAP4-6Q9BYQ5 205 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 ALX4Q9H161 411 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-206ENST00000457035 SHPKQ9UHJ6 478 aa7.78□□□□□ -1.16
ATG4A-206ENST00000457035 A0A0G2JLM5 398 aa7.77□□□□□ -1.17
ATG4A-206ENST00000457035 C9orf170A2RU37 121 aa7.77□□□□□ -1.17
ATG4A-206ENST00000457035 CCL24O00175 119 aa7.77□□□□□ -1.17
ATG4A-206ENST00000457035 ST8SIA3O43173 380 aa7.77□□□□□ -1.17
ATG4A-206ENST00000457035 IGHV3-11P01762 117 aa7.77□□□□□ -1.17
ATG4A-206ENST00000457035 REG1AP05451 166 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms