RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 LCN12Q6JVE5 192 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 INO80CQ6PI98 192 aaPredicted RBP6.37□□□□□ -1.39
HDAC9-218ENST00000456174 SLC25A34Q6PIV7 304 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 Q6ZSR3 168 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 RNF144BQ7Z419 303 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 SCCPDHQ8NBX0 429 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 OR4A5Q8NH83 315 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 ABHD17AQ96GS6 310 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 JMJD8Q96S16 334 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 WDR61Q9GZS3 305 aaKnown RBP6.37□□□□□ -1.39
HDAC9-218ENST00000456174 HES4Q9HCC6 221 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 IL36BQ9NZH7 164 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 PIGLQ9Y2B2 252 aa6.37□□□□□ -1.39
HDAC9-218ENST00000456174 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.36□□□□□ -1.39
HDAC9-218ENST00000456174 MDFIC2A0A1B0GVS7 189 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 H3BRM9 83 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 FCN1O00602 326 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 NPPCP23582 126 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 PPOXP50336 477 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 LGALS4P56470 323 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 HERV-K104P63124 156 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 KIAA1644Q3SXP7 199 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 COX19Q49B96 90 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 DMRTC1Q5HYR2 192 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 TSKUQ8WUA8 353 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 PP6455Q8WZ26 134 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 RCHY1Q96PM5 261 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 TRIB1Q96RU8 372 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 GPER1Q99527 375 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 SLC39A9Q9NUM3 307 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 JKAMPQ9P055 326 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 CLCF1Q9UBD9 225 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 ANXA10Q9UJ72 324 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 TIMM9Q9Y5J7 89 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 CUL9Q8IWT3 2517 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 DOCK7Q96N67 2140 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 IGKV1-9A0A0C4DH69 117 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 CTXND1A0A1B0GTU2 59 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 PHF1O43189 567 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-218ENST00000456174 GFRA3O60609 400 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 SS18L1O75177 396 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-218ENST00000456174 AGFG2O95081 481 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 CRYBB3P26998 211 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 LRRC75BQ2VPJ9 315 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 TMEM177Q53S58 311 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 CXorf66Q5JRM2 361 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-218ENST00000456174 ZNF525Q8N782 197 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 C10orf35Q96D05 121 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 SCNM1Q9BWG6 230 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 PSG8Q9UQ74 426 aa6.36□□□□□ -1.39
HDAC9-218ENST00000456174 TSSC4Q9Y5U2 329 aaPredicted RBP6.36□□□□□ -1.39
HDAC9-218ENST00000456174 ZNF503-AS2A6NEH8 195 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 ANKRD30BLA7E2S9 258 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 OR3A4PP47883 348 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 UBE2G1P62253 170 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 ZNF90Q03938 601 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 GTF3C1Q12789 2109 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 ZNF788Q6ZQV5 615 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 OR2K2Q8NGT1 345 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 SSC4DQ8WTU2 575 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 BLNKQ8WV28 456 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 TMEM222Q9H0R3 208 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 FNDC4Q9H6D8 234 aaPredicted RBP6.35□□□□□ -1.39
HDAC9-218ENST00000456174 NECAP2Q9NVZ3 263 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 HIF1ANQ9NWT6 349 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 MRPL16Q9NX20 251 aaKnown RBP6.35□□□□□ -1.39
HDAC9-218ENST00000456174 ZNF391Q9UJN7 358 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 CFAP47Q6ZTR5 3102 aa6.35□□□□□ -1.39
HDAC9-218ENST00000456174 TEX48A0A1B0GUV7 120 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 A0A1W2PP11 408 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 SNURFLB1AK76 121 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 CLEC3BP05452 202 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 CA7P43166 264 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 TESK1Q15569 626 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 KISS1Q15726 138 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 PHLDA2Q53GA4 152 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 NMSQ5H8A3 153 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 Q6ZS92 163 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 RPP25LQ8N5L8 163 aaKnown RBP6.34□□□□□ -1.39
HDAC9-218ENST00000456174 OR51T1Q8NGJ9 327 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 C18orf32Q8TCD1 76 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 C1QTNF5Q9BXJ0 243 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 FRYQ5TBA9 3013 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 C5orf49A4QMS7 147 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 FAM181BA6NEQ2 426 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 C2orf70A6NJV1 201 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 KIAA1324LA8MWY0 1029 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-218ENST00000456174 K7EM74 188 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 ZNF207O43670 478 aaKnown RBP6.34□□□□□ -1.39
HDAC9-218ENST00000456174 CHST1O43916 411 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 PDE6DO43924 150 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 VDAC1P21796 283 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 NPY1RP25929 384 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 BLVRBP30043 206 aaPredicted RBP6.34□□□□□ -1.39
HDAC9-218ENST00000456174 IER3P46695 156 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 PLP2Q04941 152 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 CEACAM21Q3KPI0 293 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 EBLN2Q6P2I7 272 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 FAM214BQ7L5A3 538 aa6.34□□□□□ -1.39
HDAC9-218ENST00000456174 FA2HQ7L5A8 372 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms