RNA–Protein interactions for RNA: ENST00000449858.2

GAPDHP17-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 17, humanhuman

BASIC

Gene GAPDHP17, Length 1,001 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP17-201ENST00000449858 PIGXQ8TBF5 258 aa0.6□□□□□ -2.31
GAPDHP17-201ENST00000449858 C3orf18Q9UK00 162 aa0.6□□□□□ -2.31
GAPDHP17-201ENST00000449858 FUT9Q9Y231 359 aa0.6□□□□□ -2.31
GAPDHP17-201ENST00000449858 DCCP43146 1447 aa0.6□□□□□ -2.31
GAPDHP17-201ENST00000449858 NCOA6Q14686 2063 aaPredicted RBP0.6□□□□□ -2.31
GAPDHP17-201ENST00000449858 MAP3K5Q99683 1374 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 C1orf232A0A0U1RR37 186 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 A0A1B0GV50 99 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 I3L521 148 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 SLC16A4O15374 487 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 KRT7P08729 469 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 COX5BP10606 129 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 KCNE1P15382 129 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 HLA-DMBP28068 263 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 RPL12P30050 165 aaKnown RBP0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 MLLT11Q13015 90 aaPredicted RBP0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 RSU1Q15404 277 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 GLT8D1Q68CQ7 371 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 COMMD7Q86VX2 200 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 DEFB125Q8N687 156 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 C12orf29Q8N999 325 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 UPF3BQ9BZI7 483 aaKnown RBP0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 OR8D2Q9GZM6 311 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 USE1Q9NZ43 259 aa0.59□□□□□ -2.31
GAPDHP17-201ENST00000449858 SETD5Q9C0A6 1442 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 LINC00854A0A1B0GVQ3 168 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 FUOMA2VDF0 154 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 C21orf140B9A014 251 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 CXCR6O00574 342 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 REG1AP05451 166 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 ZNF80P51504 273 aaPredicted RBP0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 MAP3K7CLP57077 242 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 RPL18Q07020 188 aaKnown RBP0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 DMTNQ08495 405 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 ZNF345Q14585 488 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 SURF2Q15527 256 aaPredicted RBP0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 CLVS2Q5SYC1 327 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 IBA57Q5T440 356 aaKnown RBP0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 SYPL2Q5VXT5 272 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 FAM151BQ6UXP7 276 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 TMEM156Q8N614 296 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 C11orf40Q8WZ69 217 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 DIRAS2Q96HU8 199 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 ODF3Q96PU9 254 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 SNURFQ9Y675 71 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 TNRC6BQ9UPQ9 1833 aaKnown RBP0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 CCDC88AQ3V6T2 1871 aa0.58□□□□□ -2.32
GAPDHP17-201ENST00000449858 KIF24Q5T7B8 1368 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 KIF13BQ9NQT8 1826 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 C9orf84Q5VXU9 1444 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 COL4A5P29400 1685 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 GGT3PA6NGU5 568 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 FABP5P3A8MUU1 101 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 LRRN3E7EW58 273 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 M0QZ92 97 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 PMP2P02689 132 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 SHBGP04278 402 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 FAM228BP0C875 321 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 RNASE3P12724 160 aaKnown RBP0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 MAGEA2P43356 314 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 RAB5BP61020 215 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 NAA20P61599 178 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 CTAG1AP78358 180 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 CCL20P78556 96 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 STX5Q13190 355 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 C1orf195Q5TG92 126 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 TEX36Q5VZQ5 186 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 ZNF565Q8N9K5 539 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 ZNF439Q8NDP4 499 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 OPTNQ96CV9 577 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 CNBD2Q96M20 576 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 ERMAPQ96PL5 475 aaPredicted RBP0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 SERPINI1Q99574 410 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 TRABDQ9H4I3 376 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 FAM96AQ9H5X1 160 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 FGFR1OP2Q9NVK5 253 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 PAQR5Q9NXK6 330 aaPredicted RBP0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 IL36BQ9NZH7 164 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 OR5AC2Q9NZP5 309 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 BAIAP2Q9UQB8 552 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 LAMB4A4D0S4 1761 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 PIK3R4Q99570 1358 aa0.57□□□□□ -2.32
GAPDHP17-201ENST00000449858 EML6Q6ZMW3 1958 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 GEMIN2O14893 280 aaKnown RBP0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 CASQ1P31415 396 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 MAP2K4P45985 399 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 BLVRAP53004 296 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 AP2S1P53680 142 aaPredicted RBP0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 CDK10Q15131 360 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 COQ5Q5HYK3 327 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 DEFB128Q7Z7B8 93 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 C15orf53Q8NAA6 179 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 OR4C6Q8NH72 309 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 MRPL57Q9BQC6 102 aaKnown RBP0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 REG4Q9BYZ8 158 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 DRC3Q9H069 523 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 EFCAB1Q9HAE3 211 aa0.56□□□□□ -2.32
GAPDHP17-201ENST00000449858 IGKV1-9A0A0C4DH69 117 aa0.55□□□□□ -2.32
GAPDHP17-201ENST00000449858 H0Y980 276 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms