RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.37□□□□□ -2.03
PMS1-216ENST00000447734 LYRM7Q5U5X0 104 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 AADACL3Q5VUY0 350 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 SDIM1Q6ZPB5 146 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 DHFR2Q86XF0 187 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 EXOC3-AS1Q8N2X6 119 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 ZNF709Q8N972 641 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 ST6GALNAC3Q8NDV1 305 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 OR13C4Q8NGS5 318 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 ZNF675Q8TD23 568 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 H1FXQ92522 213 aaKnown RBP2.37□□□□□ -2.03
PMS1-216ENST00000447734 HIST1H2BHQ93079 126 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 PLEKHB2Q96CS7 222 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 HIST1H2BNQ99877 126 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 HIST1H2BMQ99879 126 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 IMUPQ9GZP8 106 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 IL36BQ9NZH7 164 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 FUT9Q9Y231 359 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 ERGIC3Q9Y282 383 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 ZNF646O15015 1829 aaPredicted RBP2.37□□□□□ -2.03
PMS1-216ENST00000447734 DOCK6Q96HP0 2047 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 RALGAPA2Q2PPJ7 1873 aa2.37□□□□□ -2.03
PMS1-216ENST00000447734 ARHGEF10O15013 1369 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 KIF24Q5T7B8 1368 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 ABCC12Q96J65 1359 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 MYH2Q9UKX2 1941 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 SETD5Q9C0A6 1442 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 IGLV3-12A0A075B6K2 115 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 IGKV1D-37A0A075B6S9 117 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 IGKV1D-43A0A0B4J1Z2 117 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 C17orf51A8MQB3 221 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 C16orf90A8MZG2 172 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 IGHV1-69P01742 117 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 CSN2P05814 226 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 CASP1P29466 404 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 BLVRBP30043 206 aaPredicted RBP2.36□□□□□ -2.03
PMS1-216ENST00000447734 GTF2A1P52655 376 aaPredicted RBP2.36□□□□□ -2.03
PMS1-216ENST00000447734 RBM11P57052 281 aaKnown RBP2.36□□□□□ -2.03
PMS1-216ENST00000447734 RBX1P62877 108 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 DHRS2Q13268 280 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 CNEP1R1Q8N9A8 125 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 OR5J2Q8NH18 312 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 SMDT1Q9H4I9 107 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 GSKIPQ9P0R6 139 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 TP73-AS1Q9UF72 201 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 AMMECR1Q9Y4X0 333 aaPredicted RBP2.36□□□□□ -2.03
PMS1-216ENST00000447734 DENND4BO75064 1496 aaPredicted RBP2.36□□□□□ -2.03
PMS1-216ENST00000447734 ATG2BQ96BY7 2078 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 PTPRJQ12913 1337 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 CPDO75976 1380 aa2.36□□□□□ -2.03
PMS1-216ENST00000447734 DSCAMO60469 2012 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 HECW1Q76N89 1606 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 PLA2R1Q13018 1463 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 IGHV3OR16-8A0A075B7F1 116 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 IGHV3-73A0A0B4J1V6 119 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 TRAV41A0A0B4J266 112 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 DUXBA0A1W2PPF3 345 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 C19orf71A6NCJ1 209 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 GGT3PA6NGU5 568 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 ARL5CA6NH57 179 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 TXNDC9O14530 226 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 LEPROTO15243 131 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 IGKV1-5P01602 117 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 PPBPP02775 128 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 GZMHP20718 246 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 LPAR6P43657 344 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 AP1S1P61966 158 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 AKR1C1Q04828 323 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 LTC4SQ16873 150 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 ZNF660Q6AZW8 331 aaPredicted RBP2.35□□□□□ -2.03
PMS1-216ENST00000447734 TCF24Q7RTU0 167 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 CLVS1Q8IUQ0 354 aaPredicted RBP2.35□□□□□ -2.03
PMS1-216ENST00000447734 Q8N9L7 120 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 OR10D4PQ8NGN7 298 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 ZNF285Q96NJ3 590 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 DERL1Q9BUN8 251 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 TTTY13Q9BZ97 58 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 XAGE1AQ9HD64 81 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 ANAPC11Q9NYG5 84 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 ZNF443Q9Y2A4 671 aaPredicted RBP2.35□□□□□ -2.03
PMS1-216ENST00000447734 ZNF835Q9Y2P0 537 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 ASB4Q9Y574 426 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 ZNF638Q14966 1978 aaKnown RBP2.35□□□□□ -2.03
PMS1-216ENST00000447734 KIF1BO60333 1816 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 TUBGCP6Q96RT7 1819 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 NID2Q14112 1375 aa2.35□□□□□ -2.03
PMS1-216ENST00000447734 NUP160Q12769 1436 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 FMN1Q68DA7 1419 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 THADAQ6YHU6 1953 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 NEO1Q92859 1461 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 CROCCQ5TZA2 2017 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 TRAV38-1A0A0B4J264 116 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 IGKV6D-41A0A0C4DH26 115 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 TRAPPC2LH3BP13 241 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 M0QZK8 103 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 UBFD1O14562 309 aaKnown RBP2.34□□□□□ -2.03
PMS1-216ENST00000447734 CST8O60676 142 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 PIAS1O75925 651 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 CD200P41217 278 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 MEF2BQ02080 365 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms