RNA–Protein interactions for RNA: ENST00000444664.5

SHC1-209, Transcript of SHC adaptor protein 1, humanhuman

TSL 5

Gene SHC1, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-209ENST00000444664 TOMM5Q8N4H5 51 aa12.9□□□□□ -0.34
SHC1-209ENST00000444664 OR10W1Q8NGF6 305 aa12.9□□□□□ -0.34
SHC1-209ENST00000444664 OR1L8Q8NGR8 309 aa12.9□□□□□ -0.34
SHC1-209ENST00000444664 USMG5Q96IX5 58 aa12.9□□□□□ -0.34
SHC1-209ENST00000444664 GPR132Q9UNW8 380 aa12.9□□□□□ -0.34
SHC1-209ENST00000444664 OR51B2Q9Y5P1 312 aa12.9□□□□□ -0.34
SHC1-209ENST00000444664 FAM223BA6NKX1 122 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 SEC14L6B5MCN3 397 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 IGKV1-5P01602 117 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 KRTAP10-11P60412 298 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 EXOSC2Q13868 293 aaKnown RBP12.89□□□□□ -0.35
SHC1-209ENST00000444664 IZUMO4Q1ZYL8 232 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 PDLIM3Q53GG5 364 aaPredicted RBP12.89□□□□□ -0.35
SHC1-209ENST00000444664 H2BFWTQ7Z2G1 175 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 FAM223AQ8IWN6 122 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 FANCD2OSQ96PS1 177 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 HINT2Q9BX68 163 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 GPR61Q9BZJ8 451 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 AURKAIP1Q9NWT8 199 aaPredicted RBP12.89□□□□□ -0.35
SHC1-209ENST00000444664 SCP2D1Q9UJQ7 156 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 PRNDQ9UKY0 176 aa12.89□□□□□ -0.35
SHC1-209ENST00000444664 C15orf61A6NNL5 157 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 OVOL1O14753 267 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 TRAPPC2P0DI81 140 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 TRAPPC2BP0DI82 140 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 UCP1P25874 307 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 TRIM16LQ309B1 348 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 NECAP1Q8NC96 275 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 NAA60Q9H7X0 242 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 TMEM14BQ9NUH8 114 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 FBXL7Q9UJT9 491 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 TEX13DA0A0J9YY54 714 aaPredicted RBP12.88□□□□□ -0.35
SHC1-209ENST00000444664 CRYM-AS1A6NIL9 109 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 NDUFB8O95169 186 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 OR5AC1P0C628 307 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 FAUP35544 74 aaKnown RBP12.88□□□□□ -0.35
SHC1-209ENST00000444664 AKR1C2P52895 323 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 AP3S2P59780 193 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 WT1-ASQ06250 92 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 EGFEM1PQ0D2K5 195 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 C15orf32Q32M92 178 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 C9orf66Q5T8R8 295 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 GDPD1Q8N9F7 314 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 OR4A16Q8NH70 328 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 TMEM230Q96A57 120 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 SRSF8Q9BRL6 282 aaKnown RBP12.88□□□□□ -0.35
SHC1-209ENST00000444664 RANGRFQ9HD47 186 aaPredicted RBP12.88□□□□□ -0.35
SHC1-209ENST00000444664 NDUFA4L2Q9NRX3 87 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 PEF1Q9UBV8 284 aaKnown RBP12.88□□□□□ -0.35
SHC1-209ENST00000444664 S4R3C0 116 aa12.88□□□□□ -0.35
SHC1-209ENST00000444664 TGP01266 2768 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 IGLV11-55A0A075B6I3 123 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 IGHV3-23P01764 117 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 P0C879 139 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 OR13C7P0DN81 318 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 DEFA4P12838 97 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 BAK1Q16611 211 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 THOC7Q6I9Y2 204 aaKnown RBP12.87□□□□□ -0.35
SHC1-209ENST00000444664 OR5B3Q8NH48 314 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 LHFPL5Q8TAF8 219 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 LSM10Q969L4 123 aaKnown RBP12.87□□□□□ -0.35
SHC1-209ENST00000444664 SDHCQ99643 169 aaPredicted RBP12.87□□□□□ -0.35
SHC1-209ENST00000444664 TMEM222Q9H0R3 208 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 DMRT1Q9Y5R6 373 aa12.87□□□□□ -0.35
SHC1-209ENST00000444664 A0A0G2JRQ6 117 aa12.86□□□□□ -0.35
SHC1-209ENST00000444664 DHFRP00374 187 aa12.86□□□□□ -0.35
SHC1-209ENST00000444664 ZP3P21754 424 aa12.86□□□□□ -0.35
SHC1-209ENST00000444664 KLK9Q2XQG4 91 aa12.86□□□□□ -0.35
SHC1-209ENST00000444664 ZNF57Q68EA5 555 aaPredicted RBP12.86□□□□□ -0.35
SHC1-209ENST00000444664 GLYATL2Q8WU03 294 aa12.86□□□□□ -0.35
SHC1-209ENST00000444664 FKBP11Q9NYL4 201 aa12.86□□□□□ -0.35
SHC1-209ENST00000444664 PRR13Q9NZ81 148 aa12.86□□□□□ -0.35
SHC1-209ENST00000444664 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
SHC1-209ENST00000444664 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.85□□□□□ -0.35
SHC1-209ENST00000444664 B3GALNT1O75752 331 aa12.85□□□□□ -0.35
SHC1-209ENST00000444664 HIST1H1BP16401 226 aaKnown RBP12.85□□□□□ -0.35
SHC1-209ENST00000444664 MECP2P51608 486 aaKnown RBP12.85□□□□□ -0.35
SHC1-209ENST00000444664 HSD17B13Q7Z5P4 300 aaPredicted RBP12.85□□□□□ -0.35
SHC1-209ENST00000444664 SCGB3A2Q96PL1 93 aa12.85□□□□□ -0.35
SHC1-209ENST00000444664 A0A0B4J293 547 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 WI2-2373I1.2A0A1W2PRP0 233 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 MFSD2BA6NFX1 497 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 BMPR1BO00238 502 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 ATG12O94817 140 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 CDS2O95674 445 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 AKR1C4P17516 323 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 MFAP2P55001 183 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 DHODHQ02127 395 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 DCTN2Q13561 401 aaKnown RBP12.84□□□□□ -0.35
SHC1-209ENST00000444664 KLF5Q13887 457 aaPredicted RBP12.84□□□□□ -0.35
SHC1-209ENST00000444664 SPINK9Q5DT21 86 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 TRIQKQ629K1 86 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 ACSM6Q6P461 480 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 REC114Q7Z4M0 266 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 SGPP2Q8IWX5 399 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 RNASE11Q8TAA1 199 aaKnown RBP12.84□□□□□ -0.35
SHC1-209ENST00000444664 CCDC140Q96MF4 163 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 TMEM56Q96MV1 263 aa12.84□□□□□ -0.35
SHC1-209ENST00000444664 PPP5D1E7EU14 171 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms